prot_L-elsbetiae_contig10017.64.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10017.64.1
Unique Nameprot_L-elsbetiae_contig10017.64.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
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BLAST of mRNA_L-elsbetiae_contig10017.64.1 vs. uniprot
Match: D7G8H7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8H7_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.300e-57
Identity = 100/138 (72.46%), Postives = 114/138 (82.61%), Query Frame = 0 
Query:    1 MGTLLGTMFGFVSAALLTPIHGGEREDGMPAASGVVVGSSLGVLAAHSAGEGNQPLQQLASLLVLSVAAATATTAACCWLVGDILQNGGSAGIMVLATLASLGSTATFTLLKHIVLLRRAAALGSLDDRDDADILPRI 138
            MGTLLGTMFGFVSAALLTPI GGERE G+PAA GV++GSSLGVLAA+SAGEG QPL+QL  LL+LSV AA  TTAAC WL GD+LQNGGS GIMVLAT+ASLGSTA FT+ KH +LL RAA   + DDR+  + LP +
Sbjct:   16 MGTLLGTMFGFVSAALLTPIDGGEREHGLPAAPGVIMGSSLGVLAAYSAGEGTQPLRQLLYLLLLSVGAAAVTTAACSWLTGDVLQNGGSVGIMVLATVASLGSTAVFTIDKHNMLLTRAATAAAFDDRERHEGLPHL 153
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10017.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8H7_ECTSI1.300e-5772.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.625
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10017contigL-elsbetiae_contig10017:1521..2494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10017.64.1mRNA_L-elsbetiae_contig10017.64.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10017 1512..3612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10017.64.1 ID=prot_L-elsbetiae_contig10017.64.1|Name=mRNA_L-elsbetiae_contig10017.64.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
MGTLLGTMFGFVSAALLTPIHGGEREDGMPAASGVVVGSSLGVLAAHSAG
EGNQPLQQLASLLVLSVAAATATTAACCWLVGDILQNGGSAGIMVLATLA
SLGSTATFTLLKHIVLLRRAAALGSLDDRDDADILPRIHADRAPLMGPKE
T*
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