prot_L-elsbetiae_contig10680.641.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10680.641.1
Unique Nameprot_L-elsbetiae_contig10680.641.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig10680.641.1 vs. uniprot
Match: D7FUF5_ECTSI (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF5_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.100e-39
Identity = 75/87 (86.21%), Postives = 77/87 (88.51%), Query Frame = 0 
Query:   15 GEAAKFCTAWLLCVGSATVGCLLAKVLTLPQLSERGVKHLEADLKYLSNVFHALDLATPPVLEHLSLLAALGRDEAETHLAQETAAG 101
            GEAAKFCTAWLLCVGSATVGCLLAKVL+LPQLSERG KHLEADLKYLSNV HALDL  P VLEH+SLLA L RDEA THL QET AG
Sbjct:  831 GEAAKFCTAWLLCVGSATVGCLLAKVLSLPQLSERGTKHLEADLKYLSNVLHALDLPAPSVLEHVSLLAGLSRDEAATHLVQETVAG 917
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10680.641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUF5_ECTSI2.100e-3986.21Conserved oligomeric Golgi complex subunit 7 n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019335Conserved oligomeric Golgi complex subunit 7PFAMPF10191COG7coord: 8..89
e-value: 6.1E-10
score: 38.0
IPR019335Conserved oligomeric Golgi complex subunit 7PANTHERPTHR21443CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7coord: 5..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10680contigL-elsbetiae_contig10680:4688..5409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10680.641.1mRNA_L-elsbetiae_contig10680.641.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10680 4688..5409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10680.641.1 ID=prot_L-elsbetiae_contig10680.641.1|Name=mRNA_L-elsbetiae_contig10680.641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
EEEEEEEEEEEEEEGEAAKFCTAWLLCVGSATVGCLLAKVLTLPQLSERG
VKHLEADLKYLSNVFHALDLATPPVLEHLSLLAALGRDEAETHLAQETAA
GK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019335COG7