mRNA_L-elsbetiae_contig21038.6377.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: D7G0R9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R9_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.030e-65 Identity = 106/146 (72.60%), Postives = 117/146 (80.14%), Query Frame = 1 Query: 1 REHGQAIYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 REHG A+YPP EKPLKDIVTNYSSLTGS+KWLLS IMLLVFRQVLQS SMV KYFK++ +K L W T AWE L KL+QSAS LSFAVRAPSHND+EL+ LH AQDMV++AKEVI +DGVRP MHS LHYSEAV NH Sbjct: 8 REHGHALYPPREKPLKDIVTNYSSLTGSNKWLLSPIMLLVFRQVLQSSWSMV-----KYFKQDLVKTLESNWGNQTGAWEDLLKLVQSASALSFAVRAPSHNDEELQQLHKHAQDMVHVAKEVIGKDGVRPSMHSTLHYSEAVKNH 148
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: D7G5N3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N3_ECTSI) HSP 1 Score: 142 bits (359), Expect = 3.120e-41 Identity = 76/110 (69.09%), Postives = 85/110 (77.27%), Query Frame = 1 Query: 109 MLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 MLLVFRQVLQS SMV KYFK++ +K L W T AWEAL KL+QSAS LSFAVRAPSHND+EL+ LH AQDMV++AKEVI +DGVRP MHS LHYSEAV NH Sbjct: 1 MLLVFRQVLQSSWSMV-----KYFKQDLVKTLESNWGNQTGAWEALLKLVQSASALSFAVRAPSHNDEELQQLHKHAQDMVHVAKEVIGKDGVRPSMHSTLHYSEAVKNH 105
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: D8LH37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH37_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.070e-34 Identity = 73/140 (52.14%), Postives = 91/140 (65.00%), Query Frame = 1 Query: 19 IYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 +YP + LKDIV+NYSSLTGSDKW L SIMLLVFR VL +KK KR+ + L E W T E L++L+Q AS LS+AVRAPSHND+EL L A+D+V +V+ R G RP +HSILH +EA+ H Sbjct: 8 LYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVLV---------MKKNMKRQDVNDLREMWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVVGFYSKVMGRTGSRPTIHSILHTTEAIRAH 138
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE) HSP 1 Score: 129 bits (323), Expect = 8.940e-32 Identity = 74/140 (52.86%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 19 IYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 +YP + LKDIVTNYSSLTGSDKW L SIMLLVFR VL + +M KK KR+ I L + W T E L+KL++ AS LS AVRAPSHND EL L A+D+V + +V+ R G RP +HS+LH S+A+ H Sbjct: 565 LYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVFRPVLANVGAM-----KKNMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLDLLARDVVGVYSKVLGRTGSRPTIHSVLHTSQAIRAH 699
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.620e-29 Identity = 69/140 (49.29%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 19 IYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 +YPP + LKDIVTNY+SLTGSDKW L SIMLLVFR VLQ+ +M + I L +W T EALR+LL+ AS LS A+RAPS + EL L A+D V +++ R G RP +HSILH EA+ H Sbjct: 122 LYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVFRMVLQNVPAMTRE----------INDLKAEWGTYEDVLEALRELLKRASLLSIALRAPSFTEPELLQLDKLARDAVGAFFKIMGRTGSRPTIHSILHTVEAIRLH 251
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE) HSP 1 Score: 117 bits (294), Expect = 6.290e-28 Identity = 68/143 (47.55%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 10 GQAIYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 G +YPP PLKDI TNYSSL GSDKWLL SI+LLV R VL ++ K+Y K ++ L + W LRKLLQ AS L+FAVR+PS E K L A+D V + E++ R GVR +HS LHY +A+ H Sbjct: 411 GSTLYPPATAPLKDICTNYSSLKGSDKWLLGSILLLVSRCVLHDATAL-----KEYVKPRELQALKDTWGGEQAVLAQLRKLLQVASALTFAVRSPSFYKAERKKLMEHARDTVGVYAELLGRGGVRTTVHSALHYVQAIEEH 548
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: A0A6H5JWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD2_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.370e-27 Identity = 63/111 (56.76%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 19 IYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMV 351 +YP + LKDIV+NYSSLTGSDKW L SIMLLVFR VLQ +M KK KR+ I L E W T E L++L+Q AS LS+AVRAPSHND+EL L A+D+V Sbjct: 52 LYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVLQDVRAM-----KKNMKRQDINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 157
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 115 bits (289), Expect = 3.280e-27 Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 19 IYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDM--VYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 +YPP LKDI+T+Y SLTGSDKW L SIMLLVFR VLQ SM ++ K+ +K +W T +ALR L+Q S LSFA+RAPS+ND+EL+ L A+D V +++ R G RP +HS+LH EA+ H Sbjct: 290 LYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSM-----RRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARDAPGVGAFSQMMGRTGSRPTIHSMLHAVEAIRLH 426
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.690e-27 Identity = 66/140 (47.14%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 19 IYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMVYLAKEVIERDGVRP*MHSILHYSEAVNNH 438 +YPP +KDIVTNY+SLTGSDKW L SIMLLVFR VLQ+ +M ++ I L +W T EALR+L+ +S LSFA+RAPS + EL+ L A+D V +++ R G RP +HSILH E + H Sbjct: 858 LYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAM-----RRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAVEAFSKIMGRTGSRPTIHSILHTVETIRLH 992
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Match: D7G6M3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M3_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.390e-26 Identity = 58/114 (50.88%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 10 GQAIYPPHEKPLKDIVTNYSSLTGSDKWLLSSIMLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLQSASTLSFAVRAPSHNDQELKGLHARAQDMV 351 G +YPP +PLKD V +YSSLTGSDKWLL+SI+LLVFR V + A+M + Y K + L + + +M A ++L +L+Q+AS+LSFA+RAPS+ND E++ LH AQDM+ Sbjct: 190 GNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATM-----EMYIKGRELGELVDDYGSMQEARDSLLQLVQAASSLSFALRAPSYNDVEIEQLHKHAQDMI 298 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21038.6377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21038.6377.1 >prot_L-elsbetiae_contig21038.6377.1 ID=prot_L-elsbetiae_contig21038.6377.1|Name=mRNA_L-elsbetiae_contig21038.6377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp MLLVFRQVLQSPASMVSDGVKKYFKREYIKHLGEKWCTMTFAWEALRKLLback to top mRNA from alignment at L-elsbetiae_contig21038:784..1981+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21038.6377.1 ID=mRNA_L-elsbetiae_contig21038.6377.1|Name=mRNA_L-elsbetiae_contig21038.6377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1198bp|location=Sequence derived from alignment at L-elsbetiae_contig21038:784..1981+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21038:784..1981+ >mRNA_L-elsbetiae_contig21038.6377.1 ID=mRNA_L-elsbetiae_contig21038.6377.1|Name=mRNA_L-elsbetiae_contig21038.6377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig21038:784..1981+ (Laminarionema elsbetiae ELsaHSoW15)back to top |