prot_L-elsbetiae_contig10653.623.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10653.623.1
Unique Nameprot_L-elsbetiae_contig10653.623.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.580e-28
Identity = 53/90 (58.89%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    2 VVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIF 91
            V +D V+  GMD++HQ +LN  ++I+ +VL AL +AG+ +VR R A RR LPPNV P++DITSAGG+++LTGQ+LW+VSS+FPFLV+PIF
Sbjct:  111 VTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF 200          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.260e-27
Identity = 53/90 (58.89%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    2 VVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIF 91
            V +D V+  GMD++HQ +LN  ++I+ +VL AL +AG+ +VR R A RR LPPNV P++DITSAGG+++LTGQ+LW+VSS+FPFLV+PIF
Sbjct:  216 VTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF 305          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.560e-26
Identity = 55/98 (56.12%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    2 VVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 99
            V +D V+  GMDI+HQ +LN  ++I+ +V+ AL  AG+ +VRAR A  R LPPNV P++DITSAGG+S+LTGQ+LW+VSS FPFL++PIF    +L R
Sbjct:  122 VAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGR 219          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.710e-21
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    9 QTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLV 98
            Q    +  + +LN  ++I+ +V+ AL   G  VVRAR A RR LPPNV P++DITSAGG S+LTGQ+LW+V+S+FPFL++PIF    +LV
Sbjct:  174 QAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNLV 263          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.140e-20
Identity = 44/78 (56.41%), Postives = 63/78 (80.77%), Query Frame = 0
Query:   14 IIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIF 91
            ++ Q +LN  ++I+ +VL AL +A + +VR R A RR LP NV P++DITSAGG+++LTGQ+LW+VSS+FPFLV+PIF
Sbjct:    4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF 81          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.140e-18
Identity = 44/73 (60.27%), Postives = 59/73 (80.82%), Query Frame = 0
Query:   26 ILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLV 98
            I+ +V+ AL  AG+ +VRAR A RR LP NV P++DITSAGG+S+LTGQ+LWIVSS+FPFL++P+F    +LV
Sbjct:  605 IMGFVMDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSSPDNLV 677          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 8.930e-15
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    2 VVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 99
            V +D V+  GMDI+HQ +LN  ++I+ +V+ AL  AG+ +V                  DITSAGG S+LTGQ+LW+VSS+ PFL++PIF    +L R
Sbjct:   60 VAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIV-----------------PDITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGR 140          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.050e-7
Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   12 MDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 99
            M ++ Q +LN  ++I+ +V+ AL  AG+ +VRAR                   AGG S+LT Q+LW+V S+FPFL++PIF    +L R
Sbjct:    1 MLLLTQSALNSGKKIMGFVMDALDPAGSEIVRAR-------------------AGGGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGR 69          
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.490e-6
Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0
Query:    7 VQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLP-PNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVRRKLESSFTTRNGVGERH 116
            V+  G+D+ HQD+ N  R+I   +L  L  A    + + LA    L      PL D  S GGFS+L+G ++W +SSV   +  P+    AS+VR         RN    RH
Sbjct:  669 VRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMVR------LPDRNASRPRH 773          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G4Y8_ECTSI5.580e-2858.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZI4_ECTSI1.260e-2758.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW9_ECTSI2.560e-2656.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPX4_9PHAE1.710e-2152.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA9_ECTSI2.140e-2056.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LGI1_9PHAE4.140e-1860.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K975_9PHAE8.930e-1543.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWC7_9PHAE2.050e-738.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJH2_ECTSI2.490e-634.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..42
NoneNo IPR availableTMHMMTMhelixcoord: 25..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10653contigL-elsbetiae_contig10653:3305..4722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10653.623.1mRNA_L-elsbetiae_contig10653.623.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10653 3191..4814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10653.623.1 ID=prot_L-elsbetiae_contig10653.623.1|Name=mRNA_L-elsbetiae_contig10653.623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MVVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARR
FLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVRR
KLESSFTTRNGVGERHRVDERHGIECLDFVPFNAKGTMFIRCLARTPSPD
TTTSNPVQTRL*
back to top