mRNA_L-elsbetiae_contig10653.623.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 145 bits (367), Expect = 8.010e-38 Identity = 70/129 (54.26%), Postives = 96/129 (74.42%), Query Frame = 1 Query: 1 DGILRDLAYVSAGNSKPERTARSKRKGVVVGAFPNPLAMVVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIF 387 DG+ DLA V++ K E S+ GVVV +PNPL V +D V+ GMD++HQ +LN ++I+ +VL AL +AG+ +VR R A RR LPPNV P++DITSAGG+++LTGQ+LW+VSS+FPFLV+PIF Sbjct: 72 DGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF 200
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 145 bits (365), Expect = 6.020e-37 Identity = 69/129 (53.49%), Postives = 97/129 (75.19%), Query Frame = 1 Query: 1 DGILRDLAYVSAGNSKPERTARSKRKGVVVGAFPNPLAMVVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIF 387 DG+ DLA V++ + E+ S+ GVVV +PNPL V +D V+ GMD++HQ +LN ++I+ +VL AL +AG+ +VR R A RR LPPNV P++DITSAGG+++LTGQ+LW+VSS+FPFLV+PIF Sbjct: 177 DGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF 305
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 140 bits (354), Expect = 2.890e-35 Identity = 71/137 (51.82%), Postives = 97/137 (70.80%), Query Frame = 1 Query: 1 DGILRDLAYVSAGNSKPERTARSKRKGVVVGAFPNPLAMVVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 411 DG+ DL+ V+A K +R S+ GVVV +PNP V +D V+ GMDI+HQ +LN ++I+ +V+ AL AG+ +VRAR A R LPPNV P++DITSAGG+S+LTGQ+LW+VSS FPFL++PIF +L R Sbjct: 83 DGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGR 219
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.690e-20 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 139 QTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLV 408 Q + + +LN ++I+ +V+ AL G VVRAR A RR LPPNV P++DITSAGG S+LTGQ+LW+V+S+FPFL++PIF +LV Sbjct: 174 QAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNLV 263
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.060e-19 Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 37 GNSK---PERTARSKRKGVVVGAFPNPLAMVVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 411 GN K +R S+ GVVV +PNPL V +D V+ GMDI+HQ +LN ++I+ +V+ AL AG+ +V DITSAGG S+LTGQ+LW+VSS+ PFL++PIF +L R Sbjct: 30 GNPKYDIKDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIV-----------------PDITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGR 140
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 1.490e-19 Identity = 44/78 (56.41%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 154 IIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIF 387 ++ Q +LN ++I+ +VL AL +A + +VR R A RR LP NV P++DITSAGG+++LTGQ+LW+VSS+FPFLV+PIF Sbjct: 4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF 81
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.950e-17 Identity = 44/73 (60.27%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 190 ILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLV 408 I+ +V+ AL AG+ +VRAR A RR LP NV P++DITSAGG+S+LTGQ+LWIVSS+FPFL++P+F +LV Sbjct: 605 IMGFVMDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSSPDNLV 677
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 1.490e-8 Identity = 48/150 (32.00%), Postives = 70/150 (46.67%), Query Frame = 1 Query: 19 LAYVSAGNSKPERTARSKRKGVVVGAFPNPLAMVVY-DPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLP-PNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVRRKLESSFTTRNGVGERH 462 L +S + +R A S + GV NP V+ + V+ G+D+ HQD+ N R+I +L L A + + LA L PL D S GGFS+L+G ++W +SSV + P+ AS+VR RN RH Sbjct: 630 LKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMVR------LPDRNASRPRH 773
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 9.080e-7 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 148 MDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLPPNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 411 M ++ Q +LN ++I+ +V+ AL AG+ +VRAR AGG S+LT Q+LW+V S+FPFL++PIF +L R Sbjct: 1 MLLLTQSALNSGKKIMGFVMDALDPAGSEIVRAR-------------------AGGGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGR 69
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 1.020e-6 Identity = 42/133 (31.58%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 19 LAYVSAGNSKPERTARSKRKGVVVGAFPNPLAMVVY-DPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRFLP-PNVFPLSDITSAGGFSSLTGQELWIVSSVFPFLVSPIFEDAASLVR 411 L +S + +R A S + GV NP V+ + V+ G+D+ HQD+ N +I +L L A + + LA L PL D S GGFS+L+G ++W +SSV + P+ AS+ R Sbjct: 536 LKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKR 668 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10653.623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10653.623.1 >prot_L-elsbetiae_contig10653.623.1 ID=prot_L-elsbetiae_contig10653.623.1|Name=mRNA_L-elsbetiae_contig10653.623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp MVVYDPVQQTGMDIIHQDSLNCDRRILAWVLAALMAAGNAVVRARLAARRback to top mRNA from alignment at L-elsbetiae_contig10653:3191..4814+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10653.623.1 ID=mRNA_L-elsbetiae_contig10653.623.1|Name=mRNA_L-elsbetiae_contig10653.623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1624bp|location=Sequence derived from alignment at L-elsbetiae_contig10653:3191..4814+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10653:3191..4814+ >mRNA_L-elsbetiae_contig10653.623.1 ID=mRNA_L-elsbetiae_contig10653.623.1|Name=mRNA_L-elsbetiae_contig10653.623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig10653:3191..4814+ (Laminarionema elsbetiae ELsaHSoW15)back to top |