mRNA_L-elsbetiae_contig19930.5975.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A6H5JYY6_9PHAE (SQHop_cyclase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY6_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.180e-26 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 MLQCDDGHWGGDY GPMFLMPG+I+AF+VTGTPLGE RRAGMEAYLRNHQQ Sbjct: 171 MLQCDDGHWGGDYAGPMFLMPGLIVAFYVTGTPLGEERRAGMEAYLRNHQQA 222
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: D8LFF9_ECTSI (Cycloartenol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFF9_ECTSI) HSP 1 Score: 108 bits (269), Expect = 3.660e-26 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 MLQCDDGHWGGDY GPMFLMPG+I+AF+VTGTPLGE RRAGMEAYLRNHQQ Sbjct: 171 MLQCDDGHWGGDYAGPMFLMPGLIVAFYVTGTPLGEERRAGMEAYLRNHQQA 222
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A4D9D0X3_9STRA (AGC-kinase C-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0X3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.780e-19 Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQ 153 MLQC+DGHW GDYGGPMFLMPG+I A ++TG PLGE+R M AYL NHQQ Sbjct: 183 MLQCEDGHWAGDYGGPMFLMPGLIFACYITGVPLGEARTTAMRAYLLNHQQ 233
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A835ZEP3_9STRA (Terpene cyclase/mutase family member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.910e-17 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQ 153 M+QC+DGHWGGDYGGP+FLMPGMIIA +V G P+ +R A M YL NHQQ Sbjct: 212 MVQCEDGHWGGDYGGPLFLMPGMIIAHYVIGEPIAGARAAAMRHYLLNHQQ 262
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A482SSA2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSA2_9ARCH) HSP 1 Score: 83.2 bits (204), Expect = 2.600e-17 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 MLQ +DGHW GDYGGPMFLMPG+I H+T TP RR GM AYL+NHQQ+ Sbjct: 94 MLQSEDGHWAGDYGGPMFLMPGLICVLHITKTPYPPGRREGMIAYLKNHQQL 145
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A6S9IZA0_HETAK (Terpene cyclase/mutase family member (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IZA0_HETAK) HSP 1 Score: 80.1 bits (196), Expect = 3.150e-16 Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 MLQ +DGHW GDYGGPMFL+PG++IA H+TG L +R M YLRNHQQ Sbjct: 220 MLQTEDGHWAGDYGGPMFLLPGLVIAHHITGAKLAAYKREAMVDYLRNHQQT 271
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A6U4XWX2_HEMAN (Terpene cyclase/mutase family member n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XWX2_HEMAN) HSP 1 Score: 79.7 bits (195), Expect = 4.310e-16 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 MLQCDDGH+ GDYGGPMFLMPG+IIA +VTG LG +R+ M YLRNHQQ Sbjct: 211 MLQCDDGHFAGDYGGPMFLMPGLIIACYVTGFDLG-ARKQAMIVYLRNHQQA 261
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A7S0VGU1_9CRYP (Terpene cyclase/mutase family member (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGU1_9CRYP) HSP 1 Score: 79.0 bits (193), Expect = 8.030e-16 Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 1 MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 MLQCDDGH+ GDYGGPMFLMPG+II H+TG LG R+ M YLRNHQQ Sbjct: 205 MLQCDDGHFAGDYGGPMFLMPGLIIVCHITGFDLGP-RKDAMITYLRNHQQA 255
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A2V3IV80_9FLOR (Terpene cyclase/mutase family member n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV80_9FLOR) HSP 1 Score: 78.6 bits (192), Expect = 1.100e-15 Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 4 LQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQ 150 LQC DGHW GDYGGPMFLMPGMIIA +VT TP S++ M YLRNHQ Sbjct: 105 LQCGDGHWAGDYGGPMFLMPGMIIACYVTKTPFHASQKQEMIRYLRNHQ 153
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Match: A0A0G4EMH6_VITBC (Terpene cyclase/mutase family member n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EMH6_VITBC) HSP 1 Score: 77.4 bits (189), Expect = 2.800e-15 Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 4 LQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQQV 156 LQCDDGH+ GDYGGP FL+PG++IA ++TG LGE + G+ YLRNHQQ+ Sbjct: 145 LQCDDGHFAGDYGGPHFLIPGLVIACYITGHDLGEHVKRGLCVYLRNHQQI 195 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19930.5975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19930.5975.1 >prot_L-elsbetiae_contig19930.5975.1 ID=prot_L-elsbetiae_contig19930.5975.1|Name=mRNA_L-elsbetiae_contig19930.5975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp MLQCDDGHWGGDYGGPMFLMPGMIIAFHVTGTPLGESRRAGMEAYLRNHQback to top mRNA from alignment at L-elsbetiae_contig19930:1973..2134+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19930.5975.1 ID=mRNA_L-elsbetiae_contig19930.5975.1|Name=mRNA_L-elsbetiae_contig19930.5975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=162bp|location=Sequence derived from alignment at L-elsbetiae_contig19930:1973..2134+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19930:1973..2134+ >mRNA_L-elsbetiae_contig19930.5975.1 ID=mRNA_L-elsbetiae_contig19930.5975.1|Name=mRNA_L-elsbetiae_contig19930.5975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=324bp|location=Sequence derived from alignment at L-elsbetiae_contig19930:1973..2134+ (Laminarionema elsbetiae ELsaHSoW15)back to top |