mRNA_L-elsbetiae_contig1991.5967.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 249 bits (636), Expect = 9.900e-76 Identity = 141/237 (59.49%), Postives = 165/237 (69.62%), Query Frame = 2 Query: 659 PQWHTPAGYQQPQQQAPFSGCFGITTAGTAGARDGVGGVFVPSTDVFQDNLPLEMLLDVAPLDRGGFCVVCSCTYLG-QRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRP------QSDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQ 1348 P H P Q +QQ+ SG G +++ D F ST VFQDNL L+ L D+ PLD GGFC+VCSCTY G QRAVLK+PK +GP+S ADLL EI IYKRIS RGGH NIA A G+GF + PFLVLE LEGG+LA A+E SR W D V RLPVALELADA+ +LH +A+P GF+LHRDLKPTNIGLCA+GHVK+FD GLSVVQEVR GN++QKYQ Sbjct: 9 PHLHRP----QHRQQSSISGYCGNSSSD----EDDDITAFDSSTAVFQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF---TSRGEPFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALP-GFILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQ 233
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 208 bits (529), Expect = 2.720e-60 Identity = 105/182 (57.69%), Postives = 135/182 (74.18%), Query Frame = 2 Query: 797 FQDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKVPKLEGPSS----TVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGK--PTPFLVLELLEGGNLAKALERSRPQSDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVRE 1324 F +N+ L L +V P +GGFCV+CSC Y GQ+AVLK+PK SS DLL EI+IY++IS RGGH NIA+A+G+G H+ +G+ P+PFL+LE L+GG L A ERS + WSDP+ RLPVA+ELA+A+ FLH A+P G VLHRDLKP+NIGLC GH+K+FDLGLSVV++V E Sbjct: 7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERS---TAVWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLE 185
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7S4ER90_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ER90_CHRCT) HSP 1 Score: 89.4 bits (220), Expect = 1.950e-15 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 2 Query: 851 GGFCVVCSCTYLGQRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEG--GNLAKALERSRP------QSDTWSDPVPR-LPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303 G FC V + G LKV K + S +A L ++ R+ R H NI + G H E PF+VL+ L NL + S P Q W P+ R + V+L+LA+A+H+ H+EA+ +LHRDLKP NIG ADG + LFD GL+ Sbjct: 179 GAFCDVYIAQFEGSEVALKVLKPQHLESKLA--LKDLESEARLLHRLKHKNILQVLSEGVHETEDGARPFVVLQRLASVLTNLLPGAKESTPIWERHRQIKAW--PLSRAIEVSLQLAEALHYCHYEAIAGYALLHRDLKPDNIGFGADGRLLLFDFGLA 334
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A1E7FU65_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU65_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.800e-15 Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 806 NLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALE-----RSRPQSDTWSDPVPRLPV---ALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQ 1348 +L LL+V L GG + + + G+ V+K P+ + + + ++ E+ I+ R++ H N+ G+G+ K F+VLE L+GG L + L R R + +P L V A LA A+ + H +A+P VLHRDLKP NIG DG VKL D GLS + E + ++KY+ Sbjct: 491 DLQWRQLLNVEYLTDGGNSWIHTAIFDGKPVVVKTLRPECQDTALAINEIEAEVAIHARLN----HPNVVSVIGAGW---TSKKVRFIVLERLDGGTLTQMLGYDTRIRDRRRRFWRKKSLPYLDVLRCARSLACALQYCHEQAIPGSMVLHRDLKPDNIGFTLDGKVKLIDFGLSRMLENADPTTNEKYE 674
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.370e-14 Identity = 65/180 (36.11%), Postives = 91/180 (50.56%), Query Frame = 2 Query: 818 EMLLDVAPLDRGGFCVVCSCTYLGQRAVLKVPK--LEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRP--QSDTWSDPVPR-------------LPVALELADAMHFLHFEAVP-SGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303 E L ++ + G C + S Y G + V+K+P+ E P DL +E+ + + H +I K G+G L E P FLVLE LE G LA L P Q +T + + + L A+ELA+A+ +LH + FV+HRDLKP NIG ADG +KLFD GL+ Sbjct: 138 EDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLD----HRHIIKLLGAG--LREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLA 311
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.390e-14 Identity = 67/190 (35.26%), Postives = 87/190 (45.79%), Query Frame = 2 Query: 800 QDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRPQSDT----WSDP----VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKY 1345 Q L L V L GG V + + G+ V+K K E VA + EI I R H N+ + G+G K F+VLE L+GG+L + L D W V L A +A AM + H +AVP VLHRDLKP NIG DG +K+FD GL+ + E D+KY Sbjct: 195 QLTLKWRQLRHVEYLTDGGNSWVHTAIFNGKPVVVKTLKPECQDVVVA--INEIESEVAIHARLNHLNVVELIGAG---TTSKGVRFVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDVLRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKY 379
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC) HSP 1 Score: 84.7 bits (208), Expect = 8.750e-14 Identity = 58/186 (31.18%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 800 QDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTP----FLVLELLEGGNLAKALERSRPQSDT----WSDP----VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQE 1315 Q NL + L +V L GG + + + G+ V+K P+ + + + ++ E+ I+ R+ H NI K G+GF TP F+VLE L+GG +++ L D W+ + L + +LA+++ + H A+P+ V+HRDLKP NIG DG ++LFD GL+ + E Sbjct: 439 QLNLQWDSLRNVEYLTDGGNAWIHTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLD----HPNICKLVGAGF-------TPRGIRFIVLERLDGGTMSQLLGYDNRIRDRRRRFWNKKKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVE 613
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.680e-13 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 2 Query: 824 LLDVAPLDRGGFCVVCSCTYLGQRAVLKVPKLEGPSSTVA--DLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAK-----ALERSRPQSDTWSDP---VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303 L +V L G C + + TY Q V+K+ + + + + +L +E+ + R++ + NI + G+G +P FL++E L+GG L++ R R + P + L ++AD + +LH EA+P VLHRD+KP NIG DG KL DLGL+ Sbjct: 239 LSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLN----NENIVRLLGAGI-----EPERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLA 399
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.760e-13 Identity = 60/178 (33.71%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 800 QDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKAL--------ERSRPQSDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303 Q NL E L +V L GG + + G+ V+K P+ + + + ++ E+ I+ R+ H NI K G+GF + F+VLE L+GG L + L R R + + L A LA+A+ + H A+P+ VLHRDLKP N+G DG VKL D GL+ Sbjct: 481 QLNLQWESLRNVEYLTDGGNNWIHTAVLQGKSVVVKTLKPECQDVALAINEIEGELEIHSRLD----HPNIVKLIGAGF---TPRGVRFVVLERLDGGTLTQLLGYDTRIRDRRRRFWAKKKISYMDVLKCARSLAEALAYCHGRAIPNAMVLHRDLKPDNVGFTLDGTVKLIDFGLA 651
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7S4EJ08_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ08_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.810e-13 Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 812 PLEM----LLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALE-----RSRPQSDTWSDPVPRLPV---ALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQ 1348 PL++ L +V L GG + + + G+ V+K P+ + S + ++ E+ ++ R++ H N+ G+G+ K F+VLE L+GG L + L R R + +P L V A LA A+ + + EA+P VLHRDLKP NIG DG VKL D GL+ + E N ++ Y+ Sbjct: 501 PLDLQWCQLHNVEYLTDGGTSWIHTAIFDGKPVVVKTLRPECQDTSIAINEIEAEVGVHSRLN----HPNVVTLIGAGW---TSKKVRFIVLERLDGGTLTQKLGYNNRIRDRRKRFFKDKRIPYLHVLRCARSLACALQYCNEEAIPGTMVLHRDLKPDNIGFSLDGQVKLIDFGLARLVENSHPNSNETYK 686 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1991.5967.1 >prot_L-elsbetiae_contig1991.5967.1 ID=prot_L-elsbetiae_contig1991.5967.1|Name=mRNA_L-elsbetiae_contig1991.5967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp MGCNKLSLTKQQHTHSPSVSSPLLMGCAYSRPTNHLGLDNKAIKDDSASAback to top mRNA from alignment at L-elsbetiae_contig1991:20189..22380+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1991.5967.1 ID=mRNA_L-elsbetiae_contig1991.5967.1|Name=mRNA_L-elsbetiae_contig1991.5967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2192bp|location=Sequence derived from alignment at L-elsbetiae_contig1991:20189..22380+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1991:20189..22380+ >mRNA_L-elsbetiae_contig1991.5967.1 ID=mRNA_L-elsbetiae_contig1991.5967.1|Name=mRNA_L-elsbetiae_contig1991.5967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1991:20189..22380+ (Laminarionema elsbetiae ELsaHSoW15)back to top |