mRNA_L-elsbetiae_contig1991.5967.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1991.5967.1
Unique NamemRNA_L-elsbetiae_contig1991.5967.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 9.900e-76
Identity = 141/237 (59.49%), Postives = 165/237 (69.62%), Query Frame = 2
Query:  659 PQWHTPAGYQQPQQQAPFSGCFGITTAGTAGARDGVGGVFVPSTDVFQDNLPLEMLLDVAPLDRGGFCVVCSCTYLG-QRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRP------QSDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQ 1348
            P  H P    Q +QQ+  SG  G +++      D     F  ST VFQDNL L+ L D+ PLD GGFC+VCSCTY G QRAVLK+PK +GP+S  ADLL EI IYKRIS RGGH NIA A G+GF     +  PFLVLE LEGG+LA A+E SR           W D V RLPVALELADA+ +LH +A+P GF+LHRDLKPTNIGLCA+GHVK+FD GLSVVQEVR GN++QKYQ
Sbjct:    9 PHLHRP----QHRQQSSISGYCGNSSSD----EDDDITAFDSSTAVFQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF---TSRGEPFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALP-GFILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQ 233          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.720e-60
Identity = 105/182 (57.69%), Postives = 135/182 (74.18%), Query Frame = 2
Query:  797 FQDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKVPKLEGPSS----TVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGK--PTPFLVLELLEGGNLAKALERSRPQSDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVRE 1324
            F +N+ L  L +V P  +GGFCV+CSC Y GQ+AVLK+PK    SS       DLL EI+IY++IS RGGH NIA+A+G+G H+ +G+  P+PFL+LE L+GG L  A ERS   +  WSDP+ RLPVA+ELA+A+ FLH  A+P G VLHRDLKP+NIGLC  GH+K+FDLGLSVV++V E
Sbjct:    7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERS---TAVWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLE 185          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7S4ER90_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ER90_CHRCT)

HSP 1 Score: 89.4 bits (220), Expect = 1.950e-15
Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  851 GGFCVVCSCTYLGQRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEG--GNLAKALERSRP------QSDTWSDPVPR-LPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303
            G FC V    + G    LKV K +   S +A  L ++    R+  R  H NI +    G H  E    PF+VL+ L     NL    + S P      Q   W  P+ R + V+L+LA+A+H+ H+EA+    +LHRDLKP NIG  ADG + LFD GL+
Sbjct:  179 GAFCDVYIAQFEGSEVALKVLKPQHLESKLA--LKDLESEARLLHRLKHKNILQVLSEGVHETEDGARPFVVLQRLASVLTNLLPGAKESTPIWERHRQIKAW--PLSRAIEVSLQLAEALHYCHYEAIAGYALLHRDLKPDNIGFGADGRLLLFDFGLA 334          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A1E7FU65_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU65_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.800e-15
Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 2
Query:  806 NLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALE-----RSRPQSDTWSDPVPRLPV---ALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQ 1348
            +L    LL+V  L  GG   + +  + G+  V+K   P+ +  +  + ++  E+ I+ R++    H N+    G+G+     K   F+VLE L+GG L + L      R R +       +P L V   A  LA A+ + H +A+P   VLHRDLKP NIG   DG VKL D GLS + E  +   ++KY+
Sbjct:  491 DLQWRQLLNVEYLTDGGNSWIHTAIFDGKPVVVKTLRPECQDTALAINEIEAEVAIHARLN----HPNVVSVIGAGW---TSKKVRFIVLERLDGGTLTQMLGYDTRIRDRRRRFWRKKSLPYLDVLRCARSLACALQYCHEQAIPGSMVLHRDLKPDNIGFTLDGKVKLIDFGLSRMLENADPTTNEKYE 674          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.370e-14
Identity = 65/180 (36.11%), Postives = 91/180 (50.56%), Query Frame = 2
Query:  818 EMLLDVAPLDRGGFCVVCSCTYLGQRAVLKVPK--LEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRP--QSDTWSDPVPR-------------LPVALELADAMHFLHFEAVP-SGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303
            E L ++  +  G  C + S  Y G + V+K+P+   E P     DL +E+ +   +     H +I K  G+G  L E  P  FLVLE LE G LA  L    P  Q +T  + + +             L  A+ELA+A+ +LH      + FV+HRDLKP NIG  ADG +KLFD GL+
Sbjct:  138 EDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLD----HRHIIKLLGAG--LREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLA 311          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.390e-14
Identity = 67/190 (35.26%), Postives = 87/190 (45.79%), Query Frame = 2
Query:  800 QDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRPQSDT----WSDP----VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKY 1345
            Q  L    L  V  L  GG   V +  + G+  V+K  K E     VA  + EI     I  R  H N+ +  G+G      K   F+VLE L+GG+L + L       D     W       V  L  A  +A AM + H +AVP   VLHRDLKP NIG   DG +K+FD GL+ + E      D+KY
Sbjct:  195 QLTLKWRQLRHVEYLTDGGNSWVHTAIFNGKPVVVKTLKPECQDVVVA--INEIESEVAIHARLNHLNVVELIGAG---TTSKGVRFVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDVLRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKY 379          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC)

HSP 1 Score: 84.7 bits (208), Expect = 8.750e-14
Identity = 58/186 (31.18%), Postives = 95/186 (51.08%), Query Frame = 2
Query:  800 QDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTP----FLVLELLEGGNLAKALERSRPQSDT----WSDP----VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQE 1315
            Q NL  + L +V  L  GG   + +  + G+  V+K   P+ +  +  + ++  E+ I+ R+     H NI K  G+GF       TP    F+VLE L+GG +++ L       D     W+      +  L  + +LA+++ + H  A+P+  V+HRDLKP NIG   DG ++LFD GL+ + E
Sbjct:  439 QLNLQWDSLRNVEYLTDGGNAWIHTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLD----HPNICKLVGAGF-------TPRGIRFIVLERLDGGTMSQLLGYDNRIRDRRRRFWNKKKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVE 613          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.680e-13
Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  824 LLDVAPLDRGGFCVVCSCTYLGQRAVLKVPKLEGPSSTVA--DLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAK-----ALERSRPQSDTWSDP---VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303
            L +V  L  G  C + + TY  Q  V+K+ + +   + +   +L +E+ +  R++    + NI +  G+G      +P  FL++E L+GG L++        R R +      P   +  L    ++AD + +LH EA+P   VLHRD+KP NIG   DG  KL DLGL+
Sbjct:  239 LSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLN----NENIVRLLGAGI-----EPERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLA 399          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.760e-13
Identity = 60/178 (33.71%), Postives = 88/178 (49.44%), Query Frame = 2
Query:  800 QDNLPLEMLLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKAL--------ERSRPQSDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLS 1303
            Q NL  E L +V  L  GG   + +    G+  V+K   P+ +  +  + ++  E+ I+ R+     H NI K  G+GF     +   F+VLE L+GG L + L         R R  +      +  L  A  LA+A+ + H  A+P+  VLHRDLKP N+G   DG VKL D GL+
Sbjct:  481 QLNLQWESLRNVEYLTDGGNNWIHTAVLQGKSVVVKTLKPECQDVALAINEIEGELEIHSRLD----HPNIVKLIGAGF---TPRGVRFVVLERLDGGTLTQLLGYDTRIRDRRRRFWAKKKISYMDVLKCARSLAEALAYCHGRAIPNAMVLHRDLKPDNVGFTLDGTVKLIDFGLA 651          
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Match: A0A7S4EJ08_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ08_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.810e-13
Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 2
Query:  812 PLEM----LLDVAPLDRGGFCVVCSCTYLGQRAVLKV--PKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSGFHLVEGKPTPFLVLELLEGGNLAKALE-----RSRPQSDTWSDPVPRLPV---ALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQ 1348
            PL++    L +V  L  GG   + +  + G+  V+K   P+ +  S  + ++  E+ ++ R++    H N+    G+G+     K   F+VLE L+GG L + L      R R +       +P L V   A  LA A+ + + EA+P   VLHRDLKP NIG   DG VKL D GL+ + E    N ++ Y+
Sbjct:  501 PLDLQWCQLHNVEYLTDGGTSWIHTAIFDGKPVVVKTLRPECQDTSIAINEIEAEVGVHSRLN----HPNVVTLIGAGW---TSKKVRFIVLERLDGGTLTQKLGYNNRIRDRRKRFFKDKRIPYLHVLRCARSLACALQYCNEEAIPGTMVLHRDLKPDNIGFSLDGQVKLIDFGLARLVENSHPNSNETYK 686          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1991.5967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMU8_9PHAE9.900e-7659.49Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5L2N4_9PHAE2.720e-6057.69Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S4ER90_CHRCT1.950e-1537.50Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A1E7FU65_9STRA2.800e-1532.98Kinase-like protein n=1 Tax=Fragilariopsis cylindr... [more]
A0A835ZE86_9STRA1.370e-1436.11Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7R9WTW5_9STRA3.390e-1435.26Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
K0R303_THAOC8.750e-1431.18Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A835Z8J1_9STRA3.680e-1331.76Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A7S2LY51_9STRA3.760e-1333.71Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4EJ08_9STRA3.810e-1332.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1991contigL-elsbetiae_contig1991:20189..22380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.0
Seed ortholog evalue1.4e-66
Seed eggNOG ortholog2880.D7FPX1
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Ec32 ortholog descriptionSerine/threonine-protein kinase CTR1
Ec32 orthologEc-01_008360.1
Exons2
Model size1348
Cds size921
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1991.5967.1prot_L-elsbetiae_contig1991.5967.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1991 20616..22380 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815823.98934-UTR-L-elsbetiae_contig1991:20188..206151622815823.98934-UTR-L-elsbetiae_contig1991:20188..20615Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1991 20189..20615 +
1691683126.5728326-UTR-L-elsbetiae_contig1991:20188..206151691683126.5728326-UTR-L-elsbetiae_contig1991:20188..20615Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1991 20189..20615 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815824.006677-CDS-L-elsbetiae_contig1991:20615..214211622815824.006677-CDS-L-elsbetiae_contig1991:20615..21421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1991 20616..21421 +
1691683126.5832202-CDS-L-elsbetiae_contig1991:20615..214211691683126.5832202-CDS-L-elsbetiae_contig1991:20615..21421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1991 20616..21421 +
1622815824.022038-CDS-L-elsbetiae_contig1991:22265..223801622815824.022038-CDS-L-elsbetiae_contig1991:22265..22380Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1991 22266..22380 +
1691683126.5911767-CDS-L-elsbetiae_contig1991:22265..223801691683126.5911767-CDS-L-elsbetiae_contig1991:22265..22380Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1991 22266..22380 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1991.5967.1

>prot_L-elsbetiae_contig1991.5967.1 ID=prot_L-elsbetiae_contig1991.5967.1|Name=mRNA_L-elsbetiae_contig1991.5967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MGCNKLSLTKQQHTHSPSVSSPLLMGCAYSRPTNHLGLDNKAIKDDSASA
RTSTITNISEPSCTSNQHLRAPPSAAMPQWHTPAGYQQPQQQAPFSGCFG
ITTAGTAGARDGVGGVFVPSTDVFQDNLPLEMLLDVAPLDRGGFCVVCSC
TYLGQRAVLKVPKLEGPSSTVADLLMEINIYKRISERGGHSNIAKAYGSG
FHLVEGKPTPFLVLELLEGGNLAKALERSRPQSDTWSDPVPRLPVALELA
DAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREG
NIDQKYQ
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mRNA from alignment at L-elsbetiae_contig1991:20189..22380+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1991.5967.1 ID=mRNA_L-elsbetiae_contig1991.5967.1|Name=mRNA_L-elsbetiae_contig1991.5967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2192bp|location=Sequence derived from alignment at L-elsbetiae_contig1991:20189..22380+ (Laminarionema elsbetiae ELsaHSoW15)
CAAAAAATAGACAAGAGAAAGACATCGAAGCGTTCTGAGGAAGGTAGTAC AATAGTCAAACGATTGTTGTTTGGCTGTTTACACCTCCAAATAAATCACG ACAAGAGAAAGACATCGAAGCGTTCTGAGGAAGGTAGTACAATAGTCAAA CGATTGTTGTTTGGCTGTTCGGATAGATCGTGCGCGGAAAAGCAGTATCT AGTCGGCTCCACCGCCTCTCTCGTGTCGGGATGTACACGAAATTAAAGTG TCCGCCACACGATCAGCCTCGATCTTTTGATGAAGATGCTAATCTTCCGC GTCTCCTCGGACAATTATTTCGACAACTACTTCGTTTTTTGACCAATCAC GGCCAAAAGAACTACTACAGAAACTTGCTCTAGGTCGACAGAGATATCGG TGGTTTCACGAACAGAAAAAGCGACAAATGGGATGCAACAAACTCTCTCT CACAAAACAACAGCACACACATTCACCTTCAGTTTCCTCTCCTCTCCTCA TGGGCTGTGCTTATAGTCGGCCCACGAATCATCTTGGCCTCGACAACAAG GCGATCAAAGACGATAGCGCAAGCGCCCGCACCAGCACTATTACCAACAT CAGTGAACCAAGCTGCACCTCGAACCAGCATCTCCGAGCGCCGCCAAGTG CTGCCATGCCGCAGTGGCACACGCCGGCCGGTTATCAGCAGCCGCAACAG CAGGCGCCCTTTTCCGGCTGCTTCGGCATCACCACCGCAGGTACAGCAGG GGCGCGAGACGGCGTCGGCGGCGTGTTTGTTCCTTCGACAGACGTGTTTC AAGATAATCTGCCGCTTGAGATGTTGCTGGATGTGGCACCCCTTGACCGG GGTGGCTTTTGTGTCGTCTGCTCTTGCACCTACCTCGGCCAGAGGGCTGT ACTGAAGGTTCCAAAGCTTGAGGGCCCCAGCAGCACCGTAGCCGATCTTC TGATGGAGATCAACATTTACAAAAGAATATCTGAACGAGGTGGGCACTCC AACATCGCCAAAGCTTACGGTTCCGGCTTTCACCTCGTTGAGGGAAAGCC CACGCCCTTCCTCGTCCTCGAGCTGCTCGAGGGCGGTAACCTTGCCAAAG CCCTGGAGCGAAGTCGACCGCAGAGTGATACATGGAGTGATCCCGTTCCA CGATTACCGGTGGCGCTGGAGTTGGCGGATGCGATGCATTTCTTGCATTT TGAGGCTGTTCCCAGTGGCTTCGTGTTGCACCGGTGAGGTTTGGGAGGGT TGTCGGGAGAGAGAGAAGGTATATATATAGAGAGAGACACATGCACCACA TCCCTCAGATGCCGGGGTTTTATGGTGTTGTTCAGGCTGAATCCTCCCAT GCACCGCCTTCGCTGGAAGTTACTTTCTGCGCGCTGTACATCTATCTGTA CATACAAAAAACATCCGATGTGATATCGGGTGAAGACAACATCTATGTAG GACTAGACTTGGATGGATTTTAGCCTCGACTAATATGTACATAGATACAC ATGCTGCAGTTTGGACTTGCATATCACTAACCCAAACCCCTGCTTGGCAG GCTTCCAAGCGCGGAATATTTCAATCGTAGGATTGTCGCTAATTTCCTGC ATACCACAATGGGTGTTGATGGCAGATCCGAAAAAATCTCCTCTTCTTCT CTCCCTTCACCGGAGATGCTTGTCGTGTAGGCCGCGTACCGTGTGCGTCT GGGCGTTGCTCCCTGCGCTCCCGCCATATGCCTTCCTGATATTGTGCTTC GATATCCTCTCAAGACCAAAGAGATATCCCAATGAATCCTCTGTTTGTTC GTATTTGAACTGGTATATGTTGGTCTCGATCGATCGTTAATTTTGTTCTG AAATTCCCACAACACGAGATTTTCGTGTTTTGCATCGTACGATACCAAAC GTTGTTGGCAAGTCTAGCTAGTGTATTTCGTTCGTGGGGCTTCCGAAGGC TTATAACAACATAATTAATTAAAGATACGCCAACTACCCACAACAGAGGA CGTGATACTACTGTTGTAATGGTCTAGAAGTTAACAAATATACTCCAACC CCTCTCCAACGCGAACAACCCGGGCAGAGATCTGAAGCCCACGAACATCG GGCTGTGTGCGGACGGGCACGTGAAGTTGTTTGATCTCGGGCTGTCGGTG GTGCAAGAGGTTCGGGAAGGAAACATCGACCAGAAATACCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1991:20189..22380+

>mRNA_L-elsbetiae_contig1991.5967.1 ID=mRNA_L-elsbetiae_contig1991.5967.1|Name=mRNA_L-elsbetiae_contig1991.5967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1991:20189..22380+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGATGCAACAAACTCTCTCTCACAAAACAACAGCACACACATTCACC
TTCAGTTTCCTCTCCTCTCCTCATGGGCTGTGCTTATAGTCGGCCCACGA
ATCATCTTGGCCTCGACAACAAGGCGATCAAAGACGATAGCGCAAGCGCC
CGCACCAGCACTATTACCAACATCAGTGAACCAAGCTGCACCTCGAACCA
GCATCTCCGAGCGCCGCCAAGTGCTGCCATGCCGCAGTGGCACACGCCGG
CCGGTTATCAGCAGCCGCAACAGCAGGCGCCCTTTTCCGGCTGCTTCGGC
ATCACCACCGCAGGTACAGCAGGGGCGCGAGACGGCGTCGGCGGCGTGTT
TGTTCCTTCGACAGACGTGTTTCAAGATAATCTGCCGCTTGAGATGTTGC
TGGATGTGGCACCCCTTGACCGGGGTGGCTTTTGTGTCGTCTGCTCTTGC
ACCTACCTCGGCCAGAGGGCTGTACTGAAGGTTCCAAAGCTTGAGGGCCC
CAGCAGCACCGTAGCCGATCTTCTGATGGAGATCAACATTTACAAAAGAA
TATCTGAACGAGGTGGGCACTCCAACATCGCCAAAGCTTACGGTTCCGGC
TTTCACCTCGTTGAGGGAAAGCCCACGCCCTTCCTCGTCCTCGAGCTGCT
CGAGGGCGGTAACCTTGCCAAAGCCCTGGAGCGAAGTCGACCGCAGAGTG
ATACATGGAGTGATCCCGTTCCACGATTACCGGTGGCGCTGGAGTTGGCG
GATGCGATGCATTTCTTGCATTTTGAGGCTGTTCCCAGTGGCTTCGTGTT
GCACCGATGGGATGCAACAAACTCTCTCTCACAAAACAACAGCACACACA
TTCACCTTCAGTTTCCTCTCCTCTCCTCATGGGCTGTGCTTATAGTCGGC
CCACGAATCATCTTGGCCTCGACAACAAGGCGATCAAAGACGATAGCGCA
AGCGCCCGCACCAGCACTATTACCAACATCAGTGAACCAAGCTGCACCTC
GAACCAGCATCTCCGAGCGCCGCCAAGTGCTGCCATGCCGCAGTGGCACA
CGCCGGCCGGTTATCAGCAGCCGCAACAGCAGGCGCCCTTTTCCGGCTGC
TTCGGCATCACCACCGCAGGTACAGCAGGGGCGCGAGACGGCGTCGGCGG
CGTGTTTGTTCCTTCGACAGACGTGTTTCAAGATAATCTGCCGCTTGAGA
TGTTGCTGGATGTGGCACCCCTTGACCGGGGTGGCTTTTGTGTCGTCTGC
TCTTGCACCTACCTCGGCCAGAGGGCTGTACTGAAGGTTCCAAAGCTTGA
GGGCCCCAGCAGCACCGTAGCCGATCTTCTGATGGAGATCAACATTTACA
AAAGAATATCTGAACGAGGTGGGCACTCCAACATCGCCAAAGCTTACGGT
TCCGGCTTTCACCTCGTTGAGGGAAAGCCCACGCCCTTCCTCGTCCTCGA
GCTGCTCGAGGGCGGTAACCTTGCCAAAGCCCTGGAGCGAAGTCGACCGC
AGAGTGATACATGGAGTGATCCCGTTCCACGATTACCGGTGGCGCTGGAG
TTGGCGGATGCGATGCATTTCTTGCATTTTGAGGCTGTTCCCAGTGGCTT
CGTGTTGCACCGAGATCTGAAGCCCACGAACATCGGGCTGTGTGCGGACG
GGCACGTGAAGTTGTTTGATCTCGGGCTGTCGGTGGTGCAAGAGGTTCGG
GAAGGAAACATCGACCAGAAATACCAGAGATCTGAAGCCCACGAACATCG
GGCTGTGTGCGGACGGGCACGTGAAGTTGTTTGATCTCGGGCTGTCGGTG
GTGCAAGAGGTTCGGGAAGGAAACATCGACCAGAAATACCAG
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