prot_L-elsbetiae_contig19664.5861.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19664.5861.1
Unique Nameprot_L-elsbetiae_contig19664.5861.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length114
Homology
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BLAST of mRNA_L-elsbetiae_contig19664.5861.1 vs. uniprot
Match: D8LMT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT4_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 5.650e-29
Identity = 53/67 (79.10%), Postives = 57/67 (85.07%), Query Frame = 0 
Query:   48 VRLLCRDILSGCDHGHVHVLNFSPDMVGVPSMKASKYVGQPLSSVRWGLGAPYVASWTSSRGLLQVL 114
            V  + RDI+SGCDHGHVHVLNF  DM GVP+MK SKYV QPLSSVRWG+G PYVASWTSSRGLLQ L
Sbjct:  158 VNPVSRDIVSGCDHGHVHVLNFPWDMAGVPTMKVSKYVAQPLSSVRWGMGEPYVASWTSSRGLLQRL 224
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19664.5861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMT4_ECTSI5.650e-2979.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19664contigL-elsbetiae_contig19664:15..1977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19664.5861.1mRNA_L-elsbetiae_contig19664.5861.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19664 15..1977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19664.5861.1 ID=prot_L-elsbetiae_contig19664.5861.1|Name=mRNA_L-elsbetiae_contig19664.5861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp
APGGGGGGGGGGGGGGGGRRGGGGGGGGGGGGGGGGVLRPNNSFTVSVRL
LCRDILSGCDHGHVHVLNFSPDMVGVPSMKASKYVGQPLSSVRWGLGAPY
VASWTSSRGLLQVL
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