Homology
BLAST of mRNA_L-elsbetiae_contig196.5840.1 vs. uniprot
Match:
A0A6H5JS12_9PHAE (EH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS12_9PHAE)
HSP 1 Score: 122 bits (305), Expect = 7.090e-29
Identity = 124/260 (47.69%), Postives = 137/260 (52.69%), Query Frame = 0
Query: 1 MCDDSCDQGGGGGTRRCYRHNRYSLREFRRSTR-------PGATTAAAGEDGRSVHQALCRGIVAGVLFGXXXXXXXXXXXXXXXSIVSRRNRDRGDDGVHVVSCVSNAAAAXXXXXXXXXXXXXXXRAGVS-YGG-VTTREEAMLATGRAINATTTLTCAAALGR---------ADQGATAGDSGSGEEGVPLSLPSAHPVASLVATPCTSSS-----------------SNVAFVVPIHCTDVSTGGXXXXXGDDGRA 225
MCD SC QGG GGTRRC RH R S RR+T AAAGE+G SVHQALC GIVAGVL XXXXXXXXXXXX SIVSRR RDRGDD V VVS AAAA R GV+ YG V TRE+AMLATGRAI+ T TCA AD A+AG++ L LPSA PV++ VA PCTSSS +NV F VP+ C + G G A
Sbjct: 1 MCDVSCAQGGEGGTRRCNRH-RQSTGSERRTTHIRRLDAEADVAAAAAGEEGGSVHQALCGGIVAGVLXXXXXXXXXXXXXXVGASIVSRRGRDRGDDDVRVVSYSPAAAAAPAAG-----------RGGVAGYGDMVMTREQAMLATGRAIS---TATCAXXXXXXXXXXXXXXADGVASAGEA--------LLLPSARPVSNPVAIPCTSSSIRTARRLTAVTATPAHANNVVFGVPMSCGETGGGANNDTAGGPATA 237
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig196.5840.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M C D D S C D Q G G G G G T R R C Y R H N R Y S L R E F R R S T R P G A T T A A A G E D G R S V H Q A L C R G I V A G V L F G G V L G G V V V G A A A V G A S I V S R R N R D R G D D G V H V V S C V S N A A A A A A A A A A A A G R A A A A G R A G V S Y G G V T T R E E A M L A T G R A I N A T T T L T C A A A L G R A D Q G A T A G D S G S G E E G V P L S L P S A H P V A S L V A T P C T S S S S N V A F V V P I H C T D V S T G G G G G G S G D D G R A Q P P R F D R A R R Y * 20 40 60 80 100 120 140 160 180 200 220 Expect = 7.09e-29 / Id = 47.69 Sequence A0A6H5JS12_9PHAE
Match Name E-value Identity Description
A0A6H5JS12_9PHAE 7.090e-29 47.69 EH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M C D D S C D Q G G G G G T R R C Y R H N R Y S L R E F R R S T R P G A T T A A A G E D G R S V H Q A L C R G I V A G V L F G G V L G G V V V G A A A V G A S I V S R R N R D R G D D G V H V V S C V S N A A A A A A A A A A A A G R A A A A G R A G V S Y G G V T T R E E A M L A T G R A I N A T T T L T C A A A L G R A D Q G A T A G D S G S G E E G V P L S L P S A H P V A S L V A T P C T S S S S N V A F V V P I H C T D V S T G G G G G G S G D D G R A Q P P R F D R A R R Y * 20 40 60 80 100 120 140 160 180 200 220 Score = Score = Score = Score = Sequence NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..55
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 82..236
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 56..81
None No IPR available TMHMM TMhelix coord: 56..78
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig196.5840.1 ID=prot_L-elsbetiae_contig196.5840.1|Name=mRNA_L-elsbetiae_contig196.5840.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp MCDDSCDQGGGGGTRRCYRHNRYSLREFRRSTRPGATTAAAGEDGRSVHQ ALCRGIVAGVLFGGVLGGVVVGAAAVGASIVSRRNRDRGDDGVHVVSCVS NAAAAAAAAAAAAGRAAAAGRAGVSYGGVTTREEAMLATGRAINATTTLT CAAALGRADQGATAGDSGSGEEGVPLSLPSAHPVASLVATPCTSSSSNVA FVVPIHCTDVSTGGGGGGSGDDGRAQPPRFDRARRY* back to top