prot_L-elsbetiae_contig1956.5825.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1956.5825.1
Unique Nameprot_L-elsbetiae_contig1956.5825.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 2.860e-45
Identity = 89/94 (94.68%), Postives = 94/94 (100.00%), Query Frame = 0
Query:    1 MVKDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            MVKDLK+AAEVSMGTEIT+IDIVSIK+LA+QVVALSEYRLQLS+YLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK
Sbjct:  233 MVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 326          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A7S1D2T7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2T7_CYCTE)

HSP 1 Score: 135 bits (339), Expect = 2.560e-38
Identity = 71/92 (77.17%), Postives = 85/92 (92.39%), Query Frame = 0
Query:    3 KDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            K +KDAAE+SMGTEI  +DI+ I+ALAEQV++++EYR QL +YLR+RM AIAPNLTI+VGELVGARLI+HAGSL+NLAKQPASTVQILGAEK
Sbjct:   21 KSVKDAAEISMGTEIADMDIIHIQALAEQVLSMTEYRSQLWEYLRNRMNAIAPNLTILVGELVGARLISHAGSLLNLAKQPASTVQILGAEK 112          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A7S2UY01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY01_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.550e-37
Identity = 74/92 (80.43%), Postives = 85/92 (92.39%), Query Frame = 0
Query:    3 KDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            K LK +AEVSMGTEI  ID+ SIKALA+QVV+LSEYR+QL DYL++RMQAIAPNLTI+VGELVGARL+AHAGSL+NLAK PAST+QILGAEK
Sbjct:  180 KALKASAEVSMGTEINDIDVASIKALADQVVSLSEYRVQLYDYLKNRMQAIAPNLTILVGELVGARLLAHAGSLLNLAKHPASTIQILGAEK 271          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.120e-36
Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 0
Query:    5 LKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            LK+ AE+SMGTEIT +D+ SI ALAEQVVALSEYR+QL DYL++RM AIAPNLTI+VGELVGARLIAHAGSL+NLAK PAST+QILGAEK
Sbjct:  237 LKENAEISMGTEITEMDLKSISALAEQVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEK 326          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A6U3FQT3_9CHLO (Hypothetical protein n=2 Tax=Mamiellaceae TaxID=41873 RepID=A0A6U3FQT3_9CHLO)

HSP 1 Score: 136 bits (343), Expect = 4.330e-36
Identity = 72/92 (78.26%), Postives = 85/92 (92.39%), Query Frame = 0
Query:    3 KDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            +DLKDAA +SMGTEI++ D+ +IK LA+QVV+LSEYR+QL DYL+SRM AIAPNLT++VGELVGARLI+HAGSLINLAK PASTVQILGAEK
Sbjct:  230 QDLKDAAVISMGTEISVDDLDNIKQLADQVVSLSEYRIQLYDYLKSRMNAIAPNLTVLVGELVGARLISHAGSLINLAKHPASTVQILGAEK 321          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A7S0IM80_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IM80_MICPS)

HSP 1 Score: 136 bits (342), Expect = 4.770e-36
Identity = 72/92 (78.26%), Postives = 85/92 (92.39%), Query Frame = 0
Query:    3 KDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            ++LKDAA VSMGTE+++ D+ +IK LAEQVV+LSEYR+QL DYL+SRM AIAPNLT++VGELVGARLI+HAGSLINLAK PASTVQILGAEK
Sbjct:  231 QELKDAAIVSMGTEVSVDDLENIKQLAEQVVSLSEYRMQLYDYLKSRMHAIAPNLTVLVGELVGARLISHAGSLINLAKHPASTVQILGAEK 322          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A7S1YVM4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1YVM4_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.410e-35
Identity = 72/92 (78.26%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    3 KDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            K +K+AAEVSMGTEI+ +DIV+IKALAEQV++++EYR QL +YL++RM AIAPNLTI+VGELVGARLI+HAGSL+NLAKQPASTVQILGAEK
Sbjct:  275 KAVKEAAEVSMGTEISDLDIVNIKALAEQVLSMTEYRAQLFEYLKNRMNAIAPNLTILVGELVGARLISHAGSLMNLAKQPASTVQILGAEK 366          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A1E7FUS5_9STRA (Nop-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUS5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.080e-35
Identity = 71/90 (78.89%), Postives = 85/90 (94.44%), Query Frame = 0
Query:    5 LKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            +K+AAEVSMGTEI  IDI++I+ALAEQV+++SEYR QL +YL++RM AIAPNLT++VGELVGARLIAHAGSL+NLAKQPASTVQILGAEK
Sbjct:  244 VKEAAEVSMGTEIAEIDIINIQALAEQVLSMSEYRAQLFEYLKNRMNAIAPNLTVLVGELVGARLIAHAGSLMNLAKQPASTVQILGAEK 333          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: A0A7S2LDV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LDV0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.190e-35
Identity = 66/90 (73.33%), Postives = 86/90 (95.56%), Query Frame = 0
Query:    5 LKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            +K+AAEVSMGT+IT +D ++I++LAEQV++++EYR+QL DYL++RM AIAPNLTI++GELVGARLI+H+GSL+NLAKQPASTVQILGAEK
Sbjct:  116 VKEAAEVSMGTDITDLDKINIQSLAEQVLSMTEYRIQLFDYLKNRMNAIAPNLTILLGELVGARLISHSGSLMNLAKQPASTVQILGAEK 205          
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Match: R1DVX0_EMIHU (Nop domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DVX0_EMIHU)

HSP 1 Score: 132 bits (331), Expect = 5.100e-35
Identity = 70/91 (76.92%), Postives = 82/91 (90.11%), Query Frame = 0
Query:    4 DLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK 94
            +LKDAAE+SMGTE++  D+ +I  L EQVV+LSEYR QL DYL++RM AIAPNL++MVGELVGARLIAHAGSL+NLAKQPASTVQILGAEK
Sbjct:  235 ELKDAAEISMGTEVSEEDVANILMLCEQVVSLSEYRAQLWDYLKNRMNAIAPNLSVMVGELVGARLIAHAGSLMNLAKQPASTVQILGAEK 325          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1956.5825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXU6_ECTSI2.860e-4594.68Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1D2T7_CYCTE2.560e-3877.17Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S2UY01_9STRA6.550e-3780.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YZD1_9STRA4.120e-3681.11Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6U3FQT3_9CHLO4.330e-3678.26Hypothetical protein n=2 Tax=Mamiellaceae TaxID=41... [more]
A0A7S0IM80_MICPS4.770e-3678.26Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S1YVM4_9STRA1.410e-3578.26Hypothetical protein (Fragment) n=2 Tax=Bacillario... [more]
A0A1E7FUS5_9STRA2.080e-3578.89Nop-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A7S2LDV0_9STRA2.190e-3573.33Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
R1DVX0_EMIHU5.100e-3576.92Nop domain-containing protein n=2 Tax=Emiliania hu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660coord: 1..53
e-value: 6.1E-7
score: 31.9
IPR002687Nop domainPFAMPF01798Nopcoord: 5..94
e-value: 2.5E-33
score: 115.5
IPR002687Nop domainPROSITEPS51358NOPcoord: 53..94
score: 20.501
IPR042239Nop, C-terminal domainGENE3D1.10.246.90coord: 54..94
e-value: 5.0E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR10894:SF1NUCLEOLAR PROTEIN 58coord: 3..94
NoneNo IPR availablePANTHERPTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58coord: 3..94
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 3..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1956contigL-elsbetiae_contig1956:21082..21988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1956.5825.1mRNA_L-elsbetiae_contig1956.5825.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1956 21076..21988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1956.5825.1 ID=prot_L-elsbetiae_contig1956.5825.1|Name=mRNA_L-elsbetiae_contig1956.5825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MVKDLKDAAEVSMGTEITIIDIVSIKALAEQVVALSEYRLQLSDYLRSRM
QAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029012Helix_hairpin_bin_sf
IPR002687Nop_dom
IPR042239Nop_C
IPR036070Nop_dom_sf