Homology
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
D7G0B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B1_ECTSI)
HSP 1 Score: 89.7 bits (221), Expect = 7.870e-20
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV
Sbjct: 105 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 149
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA)
HSP 1 Score: 75.5 bits (184), Expect = 8.930e-15
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
F VRVLVRNLYSSTLDLLGTG T+ QGDL N SIVDAVSGVDKV
Sbjct: 478 FKVRVLVRNLYSSTLDLLGTGVTYTQGDLGNAASIVDAVSGVDKV 522
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A2V3J7E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7E6_9FLOR)
HSP 1 Score: 62.8 bits (151), Expect = 2.670e-10
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
++VRVLVRNLYSSTLDLLGTG +F +G L +Y S+++A VDKV
Sbjct: 82 YNVRVLVRNLYSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKV 126
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A7S2ZMD3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMD3_9RHOD)
HSP 1 Score: 61.2 bits (147), Expect = 9.300e-10
Identity = 27/45 (60.00%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
+ VRVLVRNL++ TLDLLGTG ++ GD+T+ ++++AVSGVDKV
Sbjct: 108 YQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKV 152
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
M2VV10_GALSU (Transcription repressor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV10_GALSU)
HSP 1 Score: 61.2 bits (147), Expect = 9.330e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
+ VRVLVRNLYSSTLD +GTG TFA+GD+ S+ DA+ +DKV
Sbjct: 140 YRVRVLVRNLYSSTLDAVGTGCTFAKGDVRELSSLYDAMENIDKV 184
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A7S3EC31_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC31_9RHOD)
HSP 1 Score: 61.2 bits (147), Expect = 9.330e-10
Identity = 27/45 (60.00%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
+ VRVLVRNL++ TLDLLGTG ++ GD+T+ ++++AVSGVDKV
Sbjct: 108 YQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKV 152
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A7S2UKF4_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKF4_9STRA)
HSP 1 Score: 59.7 bits (143), Expect = 3.260e-9
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
F VRVLVR+LYS TL++LGTG T+ QGDL+N S+ A++ VDK+
Sbjct: 294 FRVRVLVRDLYSKTLNMLGTGVTYCQGDLSNIESLEYAITDVDKI 338
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A1X6PIK3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIK3_PORUM)
HSP 1 Score: 59.7 bits (143), Expect = 3.260e-9
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
F VRVLVR+L++ TLD LGTG +F +GDL + +++DAVSGVDK+
Sbjct: 149 FRVRVLVRDLFTKTLDTLGTGVSFVKGDLRDADTLLDAVSGVDKI 193
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
R7Q993_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q993_CHOCR)
HSP 1 Score: 59.3 bits (142), Expect = 4.450e-9
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
++VRVLVR+L+SSTLDLLGTG +F +G L +Y S+++A VDKV
Sbjct: 34 YNVRVLVRDLFSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKV 78
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Match:
A0A448Z9F2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9F2_9STRA)
HSP 1 Score: 58.2 bits (139), Expect = 1.140e-8
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1 FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV 135
F VRVLVR+LYS TL+LLGTG ++ QGDL+N S+ A++ VDK+
Sbjct: 407 FRVRVLVRDLYSQTLNLLGTGVSYCQGDLSNVESLEYALTDVDKI 451
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19433.5770.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.87e-20 / Id = 100.00 Expect = 8.93e-15 / Id = 84.44 Expect = 2.67e-10 / Id = 64.44 Expect = 9.30e-10 / Id = 60.00 Expect = 9.33e-10 / Id = 62.22 Expect = 9.33e-10 / Id = 60.00 Expect = 3.26e-9 / Id = 60.00 Expect = 3.26e-9 / Id = 60.00 Expect = 4.45e-9 / Id = 60.00 Expect = 1.14e-8 / Id = 60.00 Sequence D7G0B1_ECTSI A0A835ZGW1_9STRA A0A2V3J7E6_9FLOR A0A7S2ZMD3_9RHOD M2VV10_GALSU A0A7S3EC31_9RHOD A0A7S2UKF4_9STRA A0A1X6PIK3_PORUM R7Q993_CHOCR A0A448Z9F2_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 90.1
Seed ortholog evalue 2.8e-16
Seed eggNOG ortholog 2880.D7G0B1
KEGG ko ko:K04498
KEGG Pathway ko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting category no signal peptide or anchor
EggNOG free text desc. divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGs COG0702@1,KOG1203@2759
EC 2.3.1.48
COG Functional cat. GM
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Exons 1
Model size 135
Cds size 135
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815806.4936047-CDS-L-elsbetiae_contig19433:646..781 1622815806.4936047-CDS-L-elsbetiae_contig19433:646..781 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig19433 647..781 -
1691683114.8935797-CDS-L-elsbetiae_contig19433:646..781 1691683114.8935797-CDS-L-elsbetiae_contig19433:646..781 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig19433 647..781 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19433.5770.1
>prot_L-elsbetiae_contig19433.5770.1 ID=prot_L-elsbetiae_contig19433.5770.1|Name=mRNA_L-elsbetiae_contig19433.5770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=45bp
FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV back to top mRNA from alignment at L-elsbetiae_contig19433:647..781-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19433.5770.1 ID=mRNA_L-elsbetiae_contig19433.5770.1|Name=mRNA_L-elsbetiae_contig19433.5770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=135bp|location=Sequence derived from alignment at L-elsbetiae_contig19433:647..781- (Laminarionema elsbetiae ELsaHSoW15)TTTTCTGTGCGGGTGCTGGTGCGCAACCTGTACTCGAGCACGCTGGACCT
GCTGGGGACGGGCGCGACTTTCGCCCAGGGGGACCTCACGAACTACCGCA
GCATCGTCGACGCCGTGTCCGGGGTAGATAAGGTG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19433:647..781-
>mRNA_L-elsbetiae_contig19433.5770.1 ID=mRNA_L-elsbetiae_contig19433.5770.1|Name=mRNA_L-elsbetiae_contig19433.5770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=270bp|location=Sequence derived from alignment at L-elsbetiae_contig19433:647..781- (Laminarionema elsbetiae ELsaHSoW15) TTTTCTGTGCGGGTGCTGGTGCGCAACCTGTACTCGAGCACGCTGGACCT GCTGGGGACGGGCGCGACTTTCGCCCAGGGGGACCTCACGAACTACCGCA GCATCGTCGACGCCGTGTCCGGGGTAGATAAGGTGTTTTCTGTGCGGGTG CTGGTGCGCAACCTGTACTCGAGCACGCTGGACCTGCTGGGGACGGGCGC GACTTTCGCCCAGGGGGACCTCACGAACTACCGCAGCATCGTCGACGCCG TGTCCGGGGTAGATAAGGTG back to top