prot_L-elsbetiae_contig106.573.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig106.573.1
Unique Nameprot_L-elsbetiae_contig106.573.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length189
Homology
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BLAST of mRNA_L-elsbetiae_contig106.573.1 vs. uniprot
Match: A0A6H5L2R9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.780e-20
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0 
Query:   15 SVSTSRCTYRKQARAAICIQAAYRGERTRNRVVQPALAAFSDVCDKISAECP-GLTAESLCGPVHLPRWLSTDHCATAPSAGTC 97
            S+S  RCT R++ RAA+ +QA YRGER RNRVVQPAL AF DVC++ISAE P GLT   +CGPV LPRW S  H  ++  +G C
Sbjct:   18 SLSEPRCTLRRRTRAAVRVQAIYRGERARNRVVQPALDAFRDVCERISAEGPSGLTTACICGPVKLPRWFSDGHSDSSRCSGVC 101
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig106.573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2R9_9PHAE2.780e-2059.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 26..55
score: 6.998

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig106contigL-elsbetiae_contig106:16481..19176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig106.573.1mRNA_L-elsbetiae_contig106.573.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig106 16471..19176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig106.573.1 ID=prot_L-elsbetiae_contig106.573.1|Name=mRNA_L-elsbetiae_contig106.573.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
METFRRKGKDAYRPSVSTSRCTYRKQARAAICIQAAYRGERTRNRVVQPA
LAAFSDVCDKISAECPGLTAESLCGPVHLPRWLSTDHCATAPSAGTCVAG
ACGIGSAGNTRRANAGAAAAVSSTLLGDTVPRGEVAAKGSDESEELKRPP
PHPATPQLSSMIPSGCTLTPPTVVSAKEPGTVEAVGQDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS