Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | no signal peptide or anchor |
Exons | 2 |
Model size | 280 |
Cds size | 171 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815787.4877763-CDS-L-elsbetiae_contig1895:3273..3328 | 1622815787.4877763-CDS-L-elsbetiae_contig1895:3273..3328 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1895 3274..3328 + |
1691683102.586704-CDS-L-elsbetiae_contig1895:3273..3328 | 1691683102.586704-CDS-L-elsbetiae_contig1895:3273..3328 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1895 3274..3328 + |
1622815787.503471-CDS-L-elsbetiae_contig1895:3757..3873 | 1622815787.503471-CDS-L-elsbetiae_contig1895:3757..3873 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1895 3758..3873 + |
1691683102.5976043-CDS-L-elsbetiae_contig1895:3757..3873 | 1691683102.5976043-CDS-L-elsbetiae_contig1895:3757..3873 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1895 3758..3873 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815787.5143797-UTR-L-elsbetiae_contig1895:3873..3982 | 1622815787.5143797-UTR-L-elsbetiae_contig1895:3873..3982 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1895 3874..3982 + |
1691683102.606067-UTR-L-elsbetiae_contig1895:3873..3982 | 1691683102.606067-UTR-L-elsbetiae_contig1895:3873..3982 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1895 3874..3982 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1895.5565.1 >prot_L-elsbetiae_contig1895.5565.1 ID=prot_L-elsbetiae_contig1895.5565.1|Name=mRNA_L-elsbetiae_contig1895.5565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=57bp
REWVGTSASKQRKHCQRVGAERPCVTNCYHVELTFSCELIDLGEERATIF CFRALG* back to topmRNA from alignment at L-elsbetiae_contig1895:3274..3982+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1895.5565.1 ID=mRNA_L-elsbetiae_contig1895.5565.1|Name=mRNA_L-elsbetiae_contig1895.5565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=709bp|location=Sequence derived from alignment at L-elsbetiae_contig1895:3274..3982+ (Laminarionema elsbetiae ELsaHSoW15) CGGGAATGGGTGGGCACGAGCGCCTCCAAACAGCGAAAGCACTGCCAGCG
TGTTGGTAAAAATGAGCGGTGTGCTTTTTTTTATGAGCGGGGTCGGCTGT
CGTGCATACGTTTTTTTCTTTCTGTTGTGGCACGATAGCCGTGGGTGTCT
TGTATATCCGCCGTGAATATCCAAGGCTGACGCTGCCTCTCTATCATGAC
TTGATTCGTCCGTGTCTCTTTGTCTACTGTGTTATCCTGGTTTTAGTGTT
CGTGTGTGTGTGTGTGTGTGTGTATGTGGTTTTCTGTTTGTGCCCTGGTG
TAGCCGAGCTCGAAGAGATCGCTTGTTTACTCCGCTGCCGCCCGTTCGTA
GAACGATCCCTCTCCCTGGTGGAAGTCCTGCTTACGGCGCTACTCACCCG
TAGATGCCGGCTCTTGGCAGTTGTACCTAACTGCATAAAACGAGCTCATC
CTACGCTGTGTTTCGCCCTTTCGTTTTTCAATAGGTGCAGAACGGCCGTG
CGTCACAAATTGTTATCATGTTGAACTCACGTTCAGTTGCGAGTTGATAG
ATTTGGGAGAGGAACGTGCGACCATTTTTTGTTTCCGTGCCCTCGGGTAA
CCGGCGGGGTGGGCGGTGGAGCTGGGGCGGCCGAGGTTCACTTCGCCCTT
TTCCAGCCGTAGGTCCAGAACCACCTGAAAAAGTTTGCCGTGTCGGCCGA
TTAGCGGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1895:3274..3982+ >mRNA_L-elsbetiae_contig1895.5565.1 ID=mRNA_L-elsbetiae_contig1895.5565.1|Name=mRNA_L-elsbetiae_contig1895.5565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=342bp|location=Sequence derived from alignment at L-elsbetiae_contig1895:3274..3982+ (Laminarionema elsbetiae ELsaHSoW15) CGGGAATGGGTGGGCACGAGCGCCTCCAAACAGCGAAAGCACTGCCAGCG TGTTGCGGGAATGGGTGGGCACGAGCGCCTCCAAACAGCGAAAGCACTGC CAGCGTGTTGGTGCAGAACGGCCGTGCGTCACAAATTGTTATCATGTTGA ACTCACGTTCAGTTGCGAGTTGATAGATTTGGGAGAGGAACGTGCGACCA TTTTTTGTTTCCGTGCCCTCGGGTAAGTGCAGAACGGCCGTGCGTCACAA ATTGTTATCATGTTGAACTCACGTTCAGTTGCGAGTTGATAGATTTGGGA GAGGAACGTGCGACCATTTTTTGTTTCCGTGCCCTCGGGTAA back to top
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