prot_L-elsbetiae_contig18890.5548.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18890.5548.1
Unique Nameprot_L-elsbetiae_contig18890.5548.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length54
Homology
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BLAST of mRNA_L-elsbetiae_contig18890.5548.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 6.710e-9
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    1 MFDCHAHLTDPYFREGIDEALAQAEDVGVVGIIAVSETSEDAVKV 45
            MFDCHAHLTD    EG+ + L +AE  GV GI+AVSE+ +DA  V
Sbjct:    1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPV 45
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BLAST of mRNA_L-elsbetiae_contig18890.5548.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.170e-8
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    1 MFDCHAHLTDPYFREGIDEALAQAEDVGVVGIIAVSETSEDAVKV 45
            MFDCHAHLTD    EG+ + L +AE  GV GI+AVSE+ +DA  V
Sbjct:   46 MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPV 90
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18890.5548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNX7_ECTSI6.710e-957.78TatD DNase domain containing 3 n=1 Tax=Ectocarpus ... [more]
A0A6H5KIS3_9PHAE1.170e-857.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.140coord: 1..52
e-value: 7.8E-8
score: 33.6
IPR032466Metal-dependent hydrolaseSUPERFAMILY51556Metallo-dependent hydrolasescoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18890contigL-elsbetiae_contig18890:1877..2038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18890.5548.1mRNA_L-elsbetiae_contig18890.5548.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18890 1862..2038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18890.5548.1 ID=prot_L-elsbetiae_contig18890.5548.1|Name=mRNA_L-elsbetiae_contig18890.5548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp
MFDCHAHLTDPYFREGIDEALAQAEDVGVVGIIAVSETSEDAVKVRRHLP
NCD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032466Metal_Hydrolase