prot_L-elsbetiae_contig18806.5508.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18806.5508.1
Unique Nameprot_L-elsbetiae_contig18806.5508.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length352
Homology
BLAST of mRNA_L-elsbetiae_contig18806.5508.1 vs. uniprot
Match: A0A6H5L341_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L341_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 7.270e-40
Identity = 91/229 (39.74%), Postives = 131/229 (57.21%), Query Frame = 0
Query:  121 APPVAPAAAPPKALPAGAKILQKRKAVFWNTPVRPMLFLLRSCFDSTLEMDMPRLKMLTKDKANITQQAADQVLTLTDCKIEYRFPPMAPDVVPPTAMPPAVHYTTSIEVLLTVMAFGTENAPGICLERIRAWKRELELVQTRLTAYLQLHYVRLAHFDTKVRNMLVEAINEGLQEGFHVLALQGCELHRRYPDGPPVAGTGDPVPTPRFKRLNNLLTPHDSNSLAERA 349
            AP VA +AAPP    AG+K+ +K +A  W     P+  L R  FD+   +D+P +KM+  + ++IT+Q   Q+ +LTD KIE+ FPP + +     AMP  VH+ T I VL   + +G + A      R+ AW+ E   +  +L  YL LHY  L   + +VRN+L++AIN GL++GF +L     +L   + DGPP A   D VP PRFK L  LL    + SLAE+A
Sbjct:  171 APVVAASAAPPAPATAGSKMTEKMRAEDWKA-TGPLWLLARGGFDTRAPVDVPFVKMVAGEYSHITEQGGKQMCSLTDIKIEHCFPPKSANAAL-AAMPVTVHFDTFITVLFKTIEYGMDTAEENAKLRVAAWRAEFASITRKLATYLTLHYTGLQPHENRVRNVLLDAINRGLEDGFRILHKMAYDLRWTHQDGPPTADATDAVPFPRFKLLKTLLEEDHTQSLAEKA 397          
BLAST of mRNA_L-elsbetiae_contig18806.5508.1 vs. uniprot
Match: A0A6H5JGT0_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 6.360e-39
Identity = 91/229 (39.74%), Postives = 131/229 (57.21%), Query Frame = 0
Query:  121 APPVAPAAAPPKALPAGAKILQKRKAVFWNTPVRPMLFLLRSCFDSTLEMDMPRLKMLTKDKANITQQAADQVLTLTDCKIEYRFPPMAPDVVPPTAMPPAVHYTTSIEVLLTVMAFGTENAPGICLERIRAWKRELELVQTRLTAYLQLHYVRLAHFDTKVRNMLVEAINEGLQEGFHVLALQGCELHRRYPDGPPVAGTGDPVPTPRFKRLNNLLTPHDSNSLAERA 349
            AP VA +AAPP    AG+K+ +K +A  W     P+  L R  FD+   +D+P +KM+  + ++IT+Q   Q+ +LTD KIE+ FPP + +     AMP  VH+ T I VL   + +G + A      R+ AW+ E   +  +L  YL LHY  L   + +VRN+L++AIN GL++GF +L     +L   + DGPP A   D VP PRFK L  LL    + SLAE+A
Sbjct:  163 APVVAASAAPPAPATAGSKMTEKMRAEDWKA-TGPLWLLARGGFDTRAPVDVPFVKMVAGEYSHITEQGGKQMCSLTDIKIEHCFPPKSANAAL-AAMPVTVHFDTFITVLFKTIEYGMDTAEENAKLRVAAWRAEFASITRKLATYLTLHYTGLQPHENRVRNVLLDAINRGLEDGFRILHKMAYDLRWTHQDGPPTADATDAVPFPRFKLLKTLLEEDHTQSLAEKA 389          
BLAST of mRNA_L-elsbetiae_contig18806.5508.1 vs. uniprot
Match: A0A6H5JUF5_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF5_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.330e-36
Identity = 90/215 (41.86%), Postives = 115/215 (53.49%), Query Frame = 0
Query:  136 AGAKIL-QKRKAVFWNTPVRPMLFLLRSCFDSTLEMDMPRLKMLTKDKANITQQAADQVLTLTDCKIEYRFPPMAPDVVPPTAMPPAVHYTTSIEVLLTVMAFGTENAPGICLERIRAWKRELELVQTRLTAYLQLHYVRLAHFDTKVRNMLVEAINEGLQEGFHVLALQGCELHRRYPDGPPVAGTGDPVPTPRFKRLNNLLTPHDSNSLAERA 349
            AGAKI+ +KRK V+WNT V PM FLLRS  D   EMD  RL +LTK KA+IT+Q A+++L+L +CKIE+ FP +                                N  G                 T    Y QL Y R A   T+ RN LV+ +N G+ EGF+ L LQGC L++RYPDGPP  G+GD VPTP F+ L NL     S+SLA+ +
Sbjct:  693 AGAKIIIEKRKTVYWNTTVEPMFFLLRSSEDIGPEMDEDRLALLTKQKAHITKQVAEEILSLKNCKIEHFFPSI--------------------------------NREGC---------------GTATNNYPQLKYTRFAPHATEARNALVDGVNNGIDEGFYNLGLQGCALNQRYPDGPPAVGSGDVVPTPTFRPLKNLTGQEHSSSLAQNS 860          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18806.5508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L341_9PHAE7.270e-4039.74Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGT0_9PHAE6.360e-3939.74Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUF5_9PHAE1.330e-3641.86C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18806contigL-elsbetiae_contig18806:1888..2943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18806.5508.1mRNA_L-elsbetiae_contig18806.5508.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18806 1730..2983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18806.5508.1 ID=prot_L-elsbetiae_contig18806.5508.1|Name=mRNA_L-elsbetiae_contig18806.5508.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=352bp
MADAVNAANAAAEAAAAAAAEKGAAVEAAAAAAAVVDGQPAGGNISPGPE
EGAGGGALAAVLVQLLLAGQQQQAAQIADTLQQQQEQQQQQHQQQHQHQQ
QQAPPPAVLAPPALPAGDLIAPPVAPAAAPPKALPAGAKILQKRKAVFWN
TPVRPMLFLLRSCFDSTLEMDMPRLKMLTKDKANITQQAADQVLTLTDCK
IEYRFPPMAPDVVPPTAMPPAVHYTTSIEVLLTVMAFGTENAPGICLERI
RAWKRELELVQTRLTAYLQLHYVRLAHFDTKVRNMLVEAINEGLQEGFHV
LALQGCELHRRYPDGPPVAGTGDPVPTPRFKRLNNLLTPHDSNSLAERAL
L*
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