prot_L-elsbetiae_contig18593.5431.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18593.5431.1
Unique Nameprot_L-elsbetiae_contig18593.5431.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
BLAST of mRNA_L-elsbetiae_contig18593.5431.1 vs. uniprot
Match: D8LF12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF12_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 4.650e-48
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = 0
Query:    4 PRVASPNPAAAGRLEQRQTKAAGQLGMLGNEASDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELESGGPPLEAFASAVVISVLYVARHAYLYYGLARWLVEWEKKLF 116
            PR+AS + AAAGRLEQ Q +  GQ+GMLG+E + D M  RWGPL VAALAYVAVGAWDWTDTVEALARELE+GGPPLEAF SA+++  LYVARHAYLYYGLARWLV+WEKKLF
Sbjct:  135 PRMASAD-AAAGRLEQGQGQ--GQVGMLGDETNADGM-ARWGPLGVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFGSALLVFTLYVARHAYLYYGLARWLVQWEKKLF 243          
BLAST of mRNA_L-elsbetiae_contig18593.5431.1 vs. uniprot
Match: A0A6H5K168_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K168_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 4.160e-43
Identity = 85/113 (75.22%), Postives = 95/113 (84.07%), Query Frame = 0
Query:    4 PRVASPNPAAAGRLEQRQTKAAGQLGMLGNEASDDVMNRRWGPLIVAALAYVAVGAWDWTDTVEALARELESGGPPLEAFASAVVISVLYVARHAYLYYGLARWLVEWEKKLF 116
            PR+AS + AAAGRLEQ Q    GQ+GMLG+E + D M  RWGPL VAALAYVAVGAWDWTDTVEALARELE+ G PLEAF SA+++  LYVARHAYLYYGLARWLV+WEKKLF
Sbjct:  432 PRMASAD-AAAGRLEQAQ----GQVGMLGDETNADGM-ARWGPLGVAALAYVAVGAWDWTDTVEALARELETDGSPLEAFGSALLVFTLYVARHAYLYYGLARWLVQWEKKLF 538          
BLAST of mRNA_L-elsbetiae_contig18593.5431.1 vs. uniprot
Match: A0A835ZAI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.180e-12
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   42 RRWGPLIVAALAYVAVGAWDWTDTVEALARELESGGPPLEAFASAVVISVLYVARHAYLYYGLARW 107
            RRW  +  AALAY AVGAWDW+DT   ++ ELE G     A A+A  I  LYV RH YLYYGLA+W
Sbjct:  329 RRWATVAGAALAYTAVGAWDWSDTFLHVSSELERGLSTDAAGAAAGAIG-LYVLRHVYLYYGLAKW 393          
BLAST of mRNA_L-elsbetiae_contig18593.5431.1 vs. uniprot
Match: W7TQV4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQV4_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.320e-8
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   54 YVAVGAWDWTDTVEALARELESGGPPLEAFASAVVIS----VLYVARHAYLYYGLARWLVEWEKKLF 116
            Y++VG  DW+ T   LA+++          A A  +     VLY+ RH Y+YYGL+RW+VEWEK+LF
Sbjct:  482 YLSVGGLDWSATFGGLAKDVSQHVATEGTAAEAPTVGWQEVVLYMLRHMYIYYGLSRWVVEWEKQLF 548          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18593.5431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF12_ECTSI4.650e-4876.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K168_9PHAE4.160e-4375.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAI6_9STRA4.180e-1257.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TQV4_9STRA5.320e-843.28Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18593contigL-elsbetiae_contig18593:345..1812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18593.5431.1mRNA_L-elsbetiae_contig18593.5431.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18593 240..2241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18593.5431.1 ID=prot_L-elsbetiae_contig18593.5431.1|Name=mRNA_L-elsbetiae_contig18593.5431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
MTAPRVASPNPAAAGRLEQRQTKAAGQLGMLGNEASDDVMNRRWGPLIVA
ALAYVAVGAWDWTDTVEALARELESGGPPLEAFASAVVISVLYVARHAYL
YYGLARWLVEWEKKLF*
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