Homology
BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot
Match:
B5LWB2_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB2_9PHYC)
HSP 1 Score: 93.6 bits (231), Expect = 1.480e-20
Identity = 82/206 (39.81%), Postives = 112/206 (54.37%), Query Frame = 1
Query: 7 EGTTIMLAALSTVLILYVIQHERKSSRPFLSIVGLKKKKPVAT-------------LGAS--GCNNVSIDSPDFARCSTTLGSGRSVLRSRPRGDNIVSTFTKDNYAGEKLGNPFSVRSGPNLGSGEAFPFSSKSGDNKNNVRGQNFVSNIRQKTLNS--LGAAVSPSSTKLGASAKDIAQATNKLKDTNTVSSNSGGNLNLLHPL 573
+G TI LA L+ VLIL V Q E K RP ++ K VAT LG S CN+V++DSPDFARC+TTLG+ R++ ++ N + K + A LG GEAFPF+ KSG +N+ RG+ +R LGAAVSP+S +++I A+ KL++ N VSSN+GG+LNLL+PL
Sbjct: 4 DGPTITLAILAIVLILCVAQGEMKGPRP------VRVDKEVATSPAPSAELGGRRRLGGSRINCNDVALDSPDFARCATTLGTARTLRNTQKPALNYLQQEYKSDLA--PLGTT----------RGEAFPFTHKSGPIEND-RGR-LPDKVRHMIAGKDHLGAAVSPASM-----SREIEMASQKLENVNQVSSNTGGSLNLLNPL 184
BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot
Match:
Q6XM21_9PHYC (FirrV-1-B15 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM21_9PHYC)
HSP 1 Score: 77.4 bits (189), Expect = 1.790e-14
Identity = 70/199 (35.18%), Postives = 101/199 (50.75%), Query Frame = 1
Query: 7 EGTTIMLAALSTVLILYVI----QHERKS-------SRPFLSIVGLKKKKPVATLGASGCNNVSIDSPDFARCSTTLGSGRSVLRSRPRGDNIVSTFTKDNYAGEKLGNPFSVRSGPNLGSGEAFPFSSKSGDNKNNVRGQNFVSNIRQKTLNSLGAAVSPSSTKLGASAKDIAQATNKLKDTNTVSSNSGGNLNLLHP 570
+ T++LA L VL+++++ +H+R S P + +G +++ + L C+NV++DSPDFARC+TTLG+ R PR GE PF+ +SGP + S S N+ N LGAAVSPSS GAS ++ ATNKL+D N VS+ +GGNLNLL+P
Sbjct: 2 DAPTVVLAGLVIVLVVFMLTKNGKHKRDKKPPAPAPSAPTEAELGSRQRLGGSRLKGIDCDNVALDSPDFARCATTLGA----RRPNPR------------LKGEAF--PFTEKSGPLEANALQRKIQSVSAQNRQGGVPLNKAF---------LGAAVSPSSRSAGAS-NEMEMATNKLEDVNEVSTYAGGNLNLLNP 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.48e-20 / Id = 39.81 Expect = 1.79e-14 / Id = 35.18 Sequence B5LWB2_9PHYC Q6XM21_9PHYC
Match Name E-value Identity Description
B5LWB2_9PHYC 1.480e-20 39.81 Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM21_9PHYC 1.790e-14 35.18 FirrV-1-B15 n=1 Tax=Feldmannia irregularis virus a... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category signal peptide
Ec32 ortholog description EsV-1-97
Ec32 ortholog Ec-06_005840.1
Exons 2
Model size 576
Cds size 576
Stop 1
Start 1
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815773.118352-CDS-L-elsbetiae_contig1856:12766..12967 1622815773.118352-CDS-L-elsbetiae_contig1856:12766..12967 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1856 12767..12967 -
1691683092.7535322-CDS-L-elsbetiae_contig1856:12766..12967 1691683092.7535322-CDS-L-elsbetiae_contig1856:12766..12967 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1856 12767..12967 -
1622815773.132995-CDS-L-elsbetiae_contig1856:13045..13420 1622815773.132995-CDS-L-elsbetiae_contig1856:13045..13420 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1856 13046..13420 -
1691683092.763056-CDS-L-elsbetiae_contig1856:13045..13420 1691683092.763056-CDS-L-elsbetiae_contig1856:13045..13420 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1856 13046..13420 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1856.5410.1
>prot_L-elsbetiae_contig1856.5410.1 ID=prot_L-elsbetiae_contig1856.5410.1|Name=mRNA_L-elsbetiae_contig1856.5410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
MSEGTTIMLAALSTVLILYVIQHERKSSRPFLSIVGLKKKKPVATLGASG CNNVSIDSPDFARCSTTLGSGRSVLRSRPRGDNIVSTFTKDNYAGEKLGN PFSVRSGPNLGSGEAFPFSSKSGDNKNNVRGQNFVSNIRQKTLNSLGAAV SPSSTKLGASAKDIAQATNKLKDTNTVSSNSGGNLNLLHPL* back to top mRNA from alignment at L-elsbetiae_contig1856:12767..13420-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1856.5410.1 ID=mRNA_L-elsbetiae_contig1856.5410.1|Name=mRNA_L-elsbetiae_contig1856.5410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=654bp|location=Sequence derived from alignment at L-elsbetiae_contig1856:12767..13420- (Laminarionema elsbetiae ELsaHSoW15)ATGTCGGAAGGAACTACAATCATGCTAGCAGCTCTATCGACGGTGCTAAT
CCTGTATGTCATACAACACGAAAGGAAGTCATCGCGCCCATTTTTGTCCA
TAGTGGGGTTGAAAAAGAAGAAACCTGTTGCAACACTCGGCGCATCGGGC
TGCAATAACGTCTCGATTGACTCCCCTGATTTCGCGCGTTGTTCAACAAC
CCTTGGGAGCGGGAGGTCAGTGCTGCGCTCGAGGCCTAGGGGCGACAATA
TTGTCTCCACCTTCACCAAAGACAACTACGCCGGCGAGAAACTAGGAAAC
CCTTTCTCCGTAAGGTCGGGCCCAAACCTCGGAAGCGGAGAAGCTTTTCC
ATTCTCCTCCAAAAGTGGAGACAAT GTCTCATCATTCTCGGAGATTAAGC
GCGAAGCAAGTGGCGCAAAAGGCTCGGCTAAAACAAAGTTGCTCGGCGAC
AAGAAAAATAACGTACGGGGACAAAACTTTGTCTCCAACATAAGACAAAA
GACTCTTAATTCACTAGGCGCAGCCGTCTCTCCATCGTCGACCAAGCTGG
GGGCAAGTGCCAAGGACATTGCACAGGCTACAAACAAACTCAAAGACACA
AACACCGTCTCGTCCAATAGTGGAGGAAACCTGAATCTTCTACACCCCCT
CTAG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1856:12767..13420-
>mRNA_L-elsbetiae_contig1856.5410.1 ID=mRNA_L-elsbetiae_contig1856.5410.1|Name=mRNA_L-elsbetiae_contig1856.5410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig1856:12767..13420- (Laminarionema elsbetiae ELsaHSoW15) ATGTCGGAAGGAACTACAATCATGCTAGCAGCTCTATCGACGGTGCTAAT CCTGTATGTCATACAACACGAAAGGAAGTCATCGCGCCCATTTTTGTCCA TAGTGGGGTTGAAAAAGAAGAAACCTGTTGCAACACTCGGCGCATCGGGC TGCAATAACGTCTCGATTGACTCCCCTGATTTCGCGCGTTGTTCAACAAC CCTTGGGAGCGGGAGGTCAGTGCTGCGCTCGAGGCCTAGGGGCGACAATA TTGTCTCCACCTTCACCAAAGACAACTACGCCGGCGAGAAACTAGGAAAC CCTTTCTCCGTAAGGTCGGGCCCAAACCTCGGAAGCGGAGAAGCTTTTCC ATTCTCCTCCAAAAGTGGAGACAATATGTCGGAAGGAACTACAATCATGC TAGCAGCTCTATCGACGGTGCTAATCCTGTATGTCATACAACACGAAAGG AAGTCATCGCGCCCATTTTTGTCCATAGTGGGGTTGAAAAAGAAGAAACC TGTTGCAACACTCGGCGCATCGGGCTGCAATAACGTCTCGATTGACTCCC CTGATTTCGCGCGTTGTTCAACAACCCTTGGGAGCGGGAGGTCAGTGCTG CGCTCGAGGCCTAGGGGCGACAATATTGTCTCCACCTTCACCAAAGACAA CTACGCCGGCGAGAAACTAGGAAACCCTTTCTCCGTAAGGTCGGGCCCAA ACCTCGGAAGCGGAGAAGCTTTTCCATTCTCCTCCAAAAGTGGAGACAAT AAAAATAACGTACGGGGACAAAACTTTGTCTCCAACATAAGACAAAAGAC TCTTAATTCACTAGGCGCAGCCGTCTCTCCATCGTCGACCAAGCTGGGGG CAAGTGCCAAGGACATTGCACAGGCTACAAACAAACTCAAAGACACAAAC ACCGTCTCGTCCAATAGTGGAGGAAACCTGAATCTTCTACACCCCCTCTA GAAAAATAACGTACGGGGACAAAACTTTGTCTCCAACATAAGACAAAAGA CTCTTAATTCACTAGGCGCAGCCGTCTCTCCATCGTCGACCAAGCTGGGG GCAAGTGCCAAGGACATTGCACAGGCTACAAACAAACTCAAAGACACAAA CACCGTCTCGTCCAATAGTGGAGGAAACCTGAATCTTCTACACCCCCTCT AG back to top