prot_L-elsbetiae_contig1839.5334.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1839.5334.1
Unique Nameprot_L-elsbetiae_contig1839.5334.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length806
Homology
BLAST of mRNA_L-elsbetiae_contig1839.5334.1 vs. uniprot
Match: A0A6H5JD13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD13_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.840e-137
Identity = 386/821 (47.02%), Postives = 456/821 (55.54%), Query Frame = 0
Query:    2 LAGNTDVEVERPL--TWS---IRSPARKRQGSPSEPERTLTHVIRLHRTGSVVVERKASPRASSAGAVTTGAPGTGRPEGDHGGFYAEEQRFWRERCPYPAEATASDRREKEASADAAPRKTPLLASSSPGTQRAAGRAANYDYISAEAAYRSSPGHRAADDPYSNGKNDGFVRGGRIGRTPSRQKRANSDTEGGDGLGDADDPTPPKPRLPRRQVVGDGGDVHAAESKTRPNAERRXXXXXXXXXSLRDAEAVLHRVLESVEGGLTTAEVLF-----QNPLSPRRAPPGDRVPALRQGDVAL---PTSSNRGAQNPRAQGCA---PSPMVNSNQVHRHHRCTGSDDVSNHAPSPSSASRSPRRVPPSQLRSFESVRTKGTAMRGLSQQ-DCYEERESGEXXXXXXXXXXXXXXX-------------VXXXXXXXXXRCLHMEXXXSRRERSQTRLFQEQLRGVRQAAQQAARRTIRDDRCRASQLLAAAQKRFEEREAAAVARSEQAEESWKTEREKLTANLATAKSELERARRLAREAAEAGKKDAEGALEKQRVEMQRGWAEEKGGLRRAGEDALRRAVDAKARAEEEASLKAQTTRDSLNAQVRSWKAKSEAAEKRAAEERDKRRRLEAGAKGALAQEVEKARQAQESIIRELXXXXXXXXXXXXXXVERIKEEHRANLLRVHQDKKRLSEAARRQWDQEMREVRADAAAKIEDVTARSAAERAEALRRLKLAHDVEMRKAGRDVLRLEREVRRCQQQ-EPSGEVARSKAGASSLSPLPRGTYSPKPLHAEAGAATSCLDGVEAEGGFQSLASPAL 791
            LAG+ D  +  P+   WS     SP  K +G   E    LTHVIRLHRTGSVVVERK  P A        GA G  R        YAEE+RFW+ RCP  A+     +R                 ++SP   +A GRAANYDY +AEAA+ +      +  P  N    G   G   GR  + +    +D    +         PP  R  R+   G      A   + R  A+RR         SLRDAE+VL  VLESVE   +T EV       ++  S    P G+R   LRQ    L        RG  +    G +    SP     Q  RH+      D  N  PSP    R   R            R +G   RG SQQ D +E+R+  E            XXX             V         RC    XXX     SQTRLFQEQLR VR  AQQ ARRTI D+R R  QLL   Q+RFEE+E   VA+   AEESWK ERE L AN A AKSE+E+ RR AR AAEAG   +  ALEKQR+++QRGWAEEKGGLRRA EDALRRA++  ARA EEA+ KAQ  +DSL+AQVRSWKAK+E AE+RAAEER+KR+ LEAG KGALAQE               XXXXXXXXXXXXXX ER++EEHRA LLRVHQDKK L EAARR+W++EM+E+R +A AK ED   R+ AER+EALRRL+LAHD EMRKAGRD+LRLERE RRCQQQ EPSG   RSK   S+LSPLPRG+YS +PL +E   A SCLDGVEAE G Q+  S  L
Sbjct:  116 LAGDPDG-MHPPIGQAWSETRSTSPEPKPKGHDLETGDNLTHVIRLHRTGSVVVERKGKPNARGGIIGDAGAFGP-RQHAAEQYSYAEEERFWQARCPPEADNAVVVQR--------------TAPTASPRVTKANGRAANYDYFAAEAAHLAGSPAGKSVPPGGNSSLRGRGPGQPTGRRTTTRFEEKADACVQENCATQGTHVPPPRRTARK---GCSARAKAITERKRDKAQRRRLQ------SLRDAESVLRGVLESVEDAPSTGEVCRKTAAEEDSYSTMDTPQGERFSVLRQNVANLFRDEAHEERGESSTGKHGGSMGGTSPSKYRAQTSRHY------DGDNW-PSPLGIRRVGNR---------SGSRERGAMARGTSQQVDQHEQRQCIEDERAEGLAHSEEXXXXXXGXXXQESAGRVAELSRRIAMRCXXXXXXXXXXXXSQTRLFQEQLRSVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKERGLVAKLNLAEESWKVERESLNANTAAAKSEVEKCRRQARAAAEAGMNASREALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREEAAKKAQAAQDSLDAQVRSWKAKTETAERRAAEEREKRKGLEAGVKGALAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTERLQEEHRAALLRVHQDKKSLFEAARRKWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQEPSGMAPRSKQDNSTLSPLPRGSYSLRPLVSETAGARSCLDGVEAEMGSQTSPSSVL 895          
BLAST of mRNA_L-elsbetiae_contig1839.5334.1 vs. uniprot
Match: D7FKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN2_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 5.410e-109
Identity = 226/345 (65.51%), Postives = 263/345 (76.23%), Query Frame = 0
Query:  423 RSQTRLFQEQLRGVRQAAQQAARRTIRDDRCRASQLLAAAQKRFEEREAAAVARSEQAEESWKTEREKLTANLATAKSELERARRLAREAAEAGKKDAEGALEKQRVEMQRGWAEEKGGLRRAGEDALRRAVDAKARAEEEASLKAQTTRDSLNAQVRSWKAKSEAAEKRAAEERDKRRRLEAGAKGALAQEVEKARQAQESIIRELXXXXXXXXXXXXXXVERIKEEHRANLLRVHQDKKRLSEAARRQWDQEMREVRADAAAKIEDVTARSAAERAEALRRLKLAHDVEMRKAGRDVLRLEREVRRCQQQ-EPSGEVARSKAGASSLSPLPRGTYSPKPLHAE 766
            RSQTRLFQEQLRGVR  AQQ ARRTI D+R R  QLL   Q+RFEE+E   VA+ E AEESWK ERE L+A+ A AK E+E+ RR AR AAEA +   + ALEKQR++ QRGWAEEKGGLRRA EDALRRA++   R  EEA+ KAQT +DSL+AQ+RSWKAK+E AE+RA EER+KRR LEAG KG LAQEVEKA           XXXXXX        +ER++EEHRA LLRVHQDKK L EAARRQW++EM+E+R +A AK ED   R+ AER+EALRRL+LAHD EMRKAGRD+LRLERE RR QQQ EPSG   RSK   S+LSPLPRG+YSP+PL +E
Sbjct:  164 RSQTRLFQEQLRGVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKEKGLVAKLELAEESWKAERESLSADTAAAKCEVEKCRRQARAAAEAARNTTKEALEKQRLDFQRGWAEEKGGLRRAAEDALRRAMEGNVREREEAATKAQTAQDSLDAQLRSWKAKAETAERRATEEREKRRGLEAGVKGVLAQEVEKAXXXXXXXXXXXXXXXXXDRATHAEEIERLQEEHRAGLLRVHQDKKSLFEAARRQWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRSQQQQEPSGMAPRSKEDNSTLSPLPRGSYSPRPLLSE 508          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1839.5334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD13_9PHAE1.840e-13747.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN2_ECTSI5.410e-10965.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 572..606
NoneNo IPR availableCOILSCoilCoilcoord: 714..734
NoneNo IPR availableCOILSCoilCoilcoord: 543..563
NoneNo IPR availableCOILSCoilCoilcoord: 612..650
NoneNo IPR availableCOILSCoilCoilcoord: 474..530

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1839contigL-elsbetiae_contig1839:14960..22912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1839.5334.1mRNA_L-elsbetiae_contig1839.5334.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1839 14383..23063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1839.5334.1 ID=prot_L-elsbetiae_contig1839.5334.1|Name=mRNA_L-elsbetiae_contig1839.5334.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=806bp
MLAGNTDVEVERPLTWSIRSPARKRQGSPSEPERTLTHVIRLHRTGSVVV
ERKASPRASSAGAVTTGAPGTGRPEGDHGGFYAEEQRFWRERCPYPAEAT
ASDRREKEASADAAPRKTPLLASSSPGTQRAAGRAANYDYISAEAAYRSS
PGHRAADDPYSNGKNDGFVRGGRIGRTPSRQKRANSDTEGGDGLGDADDP
TPPKPRLPRRQVVGDGGDVHAAESKTRPNAERRRSRSRSRSRSLRDAEAV
LHRVLESVEGGLTTAEVLFQNPLSPRRAPPGDRVPALRQGDVALPTSSNR
GAQNPRAQGCAPSPMVNSNQVHRHHRCTGSDDVSNHAPSPSSASRSPRRV
PPSQLRSFESVRTKGTAMRGLSQQDCYEERESGEEEEEEGDDGEESAVRV
AELSRRIASRCLHMEQECSRRERSQTRLFQEQLRGVRQAAQQAARRTIRD
DRCRASQLLAAAQKRFEEREAAAVARSEQAEESWKTEREKLTANLATAKS
ELERARRLAREAAEAGKKDAEGALEKQRVEMQRGWAEEKGGLRRAGEDAL
RRAVDAKARAEEEASLKAQTTRDSLNAQVRSWKAKSEAAEKRAAEERDKR
RRLEAGAKGALAQEVEKARQAQESIIRELREKSEADRATHAEEVERIKEE
HRANLLRVHQDKKRLSEAARRQWDQEMREVRADAAAKIEDVTARSAAERA
EALRRLKLAHDVEMRKAGRDVLRLEREVRRCQQQEPSGEVARSKAGASSL
SPLPRGTYSPKPLHAEAGAATSCLDGVEAEGGFQSLASPALSSSNAAAAY
PGDGV*
back to top