Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 577 |
Cds size | 405 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815765.67497-UTR-L-elsbetiae_contig18380:662..834 | 1622815765.67497-UTR-L-elsbetiae_contig18380:662..834 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig18380 663..834 + |
1691683088.1769812-UTR-L-elsbetiae_contig18380:662..834 | 1691683088.1769812-UTR-L-elsbetiae_contig18380:662..834 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig18380 663..834 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815765.6876562-CDS-L-elsbetiae_contig18380:834..1239 | 1622815765.6876562-CDS-L-elsbetiae_contig18380:834..1239 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig18380 835..1239 + |
1691683088.187278-CDS-L-elsbetiae_contig18380:834..1239 | 1691683088.187278-CDS-L-elsbetiae_contig18380:834..1239 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig18380 835..1239 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18380.5330.1 >prot_L-elsbetiae_contig18380.5330.1 ID=prot_L-elsbetiae_contig18380.5330.1|Name=mRNA_L-elsbetiae_contig18380.5330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
MGRTFEGCVDVLHSHGYMCAHCCAPAESRPGVASHSIQYQSLESALYHHR PLILRPAPKHRHLSQNTRSQQRRFVATTSGGNPNGDIHSTTSVPFGSQNH RLHTYRYDTSLPLLGRSVCPLSPAPPPSASTIATS back to topmRNA from alignment at L-elsbetiae_contig18380:663..1239+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig18380.5330.1 ID=mRNA_L-elsbetiae_contig18380.5330.1|Name=mRNA_L-elsbetiae_contig18380.5330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=577bp|location=Sequence derived from alignment at L-elsbetiae_contig18380:663..1239+ (Laminarionema elsbetiae ELsaHSoW15) ATGTTCGGCGACAGCTTCCAACGTGGGCATCGGCAAATTCCCCCGGGATG
CATGCGCGGGCGAACACACTCGGGGGGGCTTTAATCAAACAAACGTGGTG
GCGGGGAGAGTCTACGCTAGAAAGCAGCTGCGTGGCCGGCTCACCGCCGG
CTCTTAGGTCGTACCATACTAAATGGGCAGGACCTTTGAGGGTTGCGTGG
ATGTTTTGCATTCGCATGGGTACATGTGCGCACACTGCTGTGCCCCCGCA
GAGAGCCGGCCGGGCGTTGCCTCACACTCGATACAATACCAGAGCCTTGA
GTCAGCTCTTTACCATCATCGCCCTTTGATTCTGCGACCGGCCCCCAAAC
ACCGTCATCTGTCGCAAAATACCCGCTCTCAACAAAGACGCTTTGTCGCC
ACCACGTCCGGGGGAAACCCAAACGGGGACATTCATTCCACGACAAGTGT
CCCCTTCGGATCGCAAAACCACCGCCTACATACATACAGATACGACACGT
CCCTGCCGCTACTTGGCCGGTCTGTGTGCCCCCTCTCCCCCGCGCCCCCC
CCCTCCGCGAGTACCATCGCCACGTCG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig18380:663..1239+ >mRNA_L-elsbetiae_contig18380.5330.1 ID=mRNA_L-elsbetiae_contig18380.5330.1|Name=mRNA_L-elsbetiae_contig18380.5330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=810bp|location=Sequence derived from alignment at L-elsbetiae_contig18380:663..1239+ (Laminarionema elsbetiae ELsaHSoW15) ATGGGCAGGACCTTTGAGGGTTGCGTGGATGTTTTGCATTCGCATGGGTA CATGTGCGCACACTGCTGTGCCCCCGCAGAGAGCCGGCCGGGCGTTGCCT CACACTCGATACAATACCAGAGCCTTGAGTCAGCTCTTTACCATCATCGC CCTTTGATTCTGCGACCGGCCCCCAAACACCGTCATCTGTCGCAAAATAC CCGCTCTCAACAAAGACGCTTTGTCGCCACCACGTCCGGGGGAAACCCAA ACGGGGACATTCATTCCACGACAAGTGTCCCCTTCGGATCGCAAAACCAC CGCCTACATACATACAGATACGACACGTCCCTGCCGCTACTTGGCCGGTC TGTGTGCCCCCTCTCCCCCGCGCCCCCCCCCTCCGCGAGTACCATCGCCA CGTCGATGGGCAGGACCTTTGAGGGTTGCGTGGATGTTTTGCATTCGCAT GGGTACATGTGCGCACACTGCTGTGCCCCCGCAGAGAGCCGGCCGGGCGT TGCCTCACACTCGATACAATACCAGAGCCTTGAGTCAGCTCTTTACCATC ATCGCCCTTTGATTCTGCGACCGGCCCCCAAACACCGTCATCTGTCGCAA AATACCCGCTCTCAACAAAGACGCTTTGTCGCCACCACGTCCGGGGGAAA CCCAAACGGGGACATTCATTCCACGACAAGTGTCCCCTTCGGATCGCAAA ACCACCGCCTACATACATACAGATACGACACGTCCCTGCCGCTACTTGGC CGGTCTGTGTGCCCCCTCTCCCCCGCGCCCCCCCCCTCCGCGAGTACCAT CGCCACGTCG back to top
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