mRNA_L-elsbetiae_contig18254.5280.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: D8LTU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTU5_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 2.720e-20 Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 1 Query: 1 KEDTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDDRPIQ 126 KE+TEEGRDKYTSVLAVLLAGSF+IPMVQYWWYIRDDDR I+ Sbjct: 118 KEETEEGRDKYTSVLAVLLAGSFVIPMVQYWWYIRDDDREIR 159
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A835ZB47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB47_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.730e-13 Identity = 27/38 (71.05%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 1 KEDTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDD 114 KE TE+G++KY +VL +LL GSF+IPMVQYWWYIRD+D Sbjct: 109 KEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 146
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A7R9U6V2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V2_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.250e-11 Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 1 KEDTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDDRPIQ 126 KE+T G+++Y +VL VL+ GSFIIPM QYWWYI+DD+ P+Q Sbjct: 96 KEETASGKNRYVAVLGVLVVGSFIIPMAQYWWYIKDDE-PLQ 136
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A1Z5K6I3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6I3_FISSO) HSP 1 Score: 60.5 bits (145), Expect = 3.140e-10 Identity = 22/36 (61.11%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 7 DTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDD 114 +T+ + KYT++LA+L+ GSFIIPM QYWWY++DDD Sbjct: 103 ETKTKKGKYTALLAILIVGSFIIPMAQYWWYVKDDD 138
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A7S0BLB9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLB9_9RHOD) HSP 1 Score: 59.3 bits (142), Expect = 8.030e-10 Identity = 22/37 (59.46%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 1 KEDTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDD 111 K++TE+G+ KYT+V+ LL SF+IPMVQY+WY++DD Sbjct: 119 KDETEKGKKKYTTVVVALLVASFVIPMVQYYWYVKDD 155
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A7S3L8Q2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8Q2_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.740e-9 Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 7 DTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDDRPIQ 126 +T+ + KYT++LAVL+ GSFIIPM QY+WY+RDDD Q Sbjct: 102 ETKTKKGKYTALLAVLIVGSFIIPMAQYFWYVRDDDSSDQ 141
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A7R9WM32_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM32_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.740e-9 Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 7 DTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDDRPIQ 126 +T+ + KYT++LA+L+ GSFI+PM QY+WY+RDDD Q Sbjct: 105 ETKTKKGKYTAILAILIVGSFIVPMAQYFWYVRDDDSSDQ 144
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: B7FPJ6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPJ6_PHATC) HSP 1 Score: 58.5 bits (140), Expect = 1.770e-9 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 7 DTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDD 114 +T+ + KYT++LAVL+ GSFIIPM QY+WY+RDDD Sbjct: 103 ETKSKKGKYTALLAVLIVGSFIIPMAQYFWYVRDDD 138
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A7S2Y3Q4_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3Q4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.860e-9 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 7 DTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDD 114 +T+ + KYT++LAVL+ GSFIIPM QY+WY+RDDD Sbjct: 107 ETKSKKGKYTALLAVLIVGSFIIPMAQYFWYVRDDD 142
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Match: A0A7S2B691_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B691_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.940e-9 Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 1 KEDTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDD 111 K+DT +G+ KY +VL VLL GSF+IPM+QY+WY+R+D Sbjct: 111 KDDTVKGKKKYIAVLGVLLFGSFVIPMLQYFWYVRED 147 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18254.5280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18254.5280.1 >prot_L-elsbetiae_contig18254.5280.1 ID=prot_L-elsbetiae_contig18254.5280.1|Name=mRNA_L-elsbetiae_contig18254.5280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=43bp KEDTEEGRDKYTSVLAVLLAGSFIIPMVQYWWYIRDDDRPIQ*back to top mRNA from alignment at L-elsbetiae_contig18254:2071..2199- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18254.5280.1 ID=mRNA_L-elsbetiae_contig18254.5280.1|Name=mRNA_L-elsbetiae_contig18254.5280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=129bp|location=Sequence derived from alignment at L-elsbetiae_contig18254:2071..2199- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18254:2071..2199- >mRNA_L-elsbetiae_contig18254.5280.1 ID=mRNA_L-elsbetiae_contig18254.5280.1|Name=mRNA_L-elsbetiae_contig18254.5280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=258bp|location=Sequence derived from alignment at L-elsbetiae_contig18254:2071..2199- (Laminarionema elsbetiae ELsaHSoW15)back to top |