prot_L-elsbetiae_contig1821.5261.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1821.5261.1
Unique Nameprot_L-elsbetiae_contig1821.5261.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig1821.5261.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 5.990e-11
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:   15 VEKAGGMQPGGAAGGLRISGCARGGDAEWSRITMAQSRIPRPECSREDIAHVVAEVTAMAGLSKVQS 81
            V+KAGG+QPG   G   +       DAEW+RI +  SR PRPECSR DIA++VA VTA AGLSK ++
Sbjct:  179 VKKAGGVQPG--VGDTALPQGVVAPDAEWARIALGLSRFPRPECSRGDIANIVAGVTAEAGLSKTRA 243
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BLAST of mRNA_L-elsbetiae_contig1821.5261.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.560e-10
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   15 VEKAGGMQPGGAAGGLRISGCARGGDAEWSRITMAQSRIPRPECSREDIAHVVAEVTAMAGLSKVQSQS 83
            +E+AGG+QPG   G   +       DAEW+RI +  SR P PECSR +IA+VVA VTA AGLSKVQ+++
Sbjct:  192 MERAGGVQPG--VGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGNIANVVAGVTAEAGLSKVQTRA 258
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1821.5261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L473_9PHAE5.990e-1155.22AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FK70_ECTSI1.560e-1053.62tRNA-splicing endonuclease positive effector n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1821contigL-elsbetiae_contig1821:15378..17151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1821.5261.1mRNA_L-elsbetiae_contig1821.5261.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1821 14515..17158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1821.5261.1 ID=prot_L-elsbetiae_contig1821.5261.1|Name=mRNA_L-elsbetiae_contig1821.5261.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
MSATRTMARAHCPHVEKAGGMQPGGAAGGLRISGCARGGDAEWSRITMAQ
SRIPRPECSREDIAHVVAEVTAMAGLSKVQSQSDPAGVGKPTDADPGTSG
HGQDSDCMQLYLGGGQAPKEQARRAT*
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