prot_L-elsbetiae_contig1817.5239.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1817.5239.1
Unique Nameprot_L-elsbetiae_contig1817.5239.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length403
Homology
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BLAST of mRNA_L-elsbetiae_contig1817.5239.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 1.160e-92
Identity = 163/180 (90.56%), Postives = 171/180 (95.00%), Query Frame = 0 
Query:    1 MVPGQPPLPEQVEGKGXXXXXXXVFLRPVPSPLGPKGFKPPTLPQLYAAVSSPDQRGWLDALQVRLVDMVQDEMVACLDEREAAVTTRPNSLTWPEFARQAVSALLLNWAEQDAIFGDTSGAPSQSQAAQGRAARKKVGKGG-KIDPQHLSPACVWLDAQHDAKHGARFIESITGNADEP 179
            MVPGQPPLPEQ +GKG XXXX  VFLRPVPSPLGPKGFK PTLPQLY+AVSSP+QRGWLDALQVRLVDMVQD+MV+ LDEREAAVTTRPNSLTWPEFARQAVSALLLNWAEQDAIFGDTSGAPSQSQAAQGRAARKK+GKGG KI+P HLSPACVWLDAQHDA+HGARFIESITGNAD P
Sbjct:   95 MVPGQPPLPEQTDGKGGXXXXG-VFLRPVPSPLGPKGFKAPTLPQLYSAVSSPEQRGWLDALQVRLVDMVQDQMVSSLDEREAAVTTRPNSLTWPEFARQAVSALLLNWAEQDAIFGDTSGAPSQSQAAQGRAARKKLGKGGGKIEPHHLSPACVWLDAQHDARHGARFIESITGNADNP 273
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BLAST of mRNA_L-elsbetiae_contig1817.5239.1 vs. uniprot
Match: A0A6H5J6B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B9_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 8.630e-65
Identity = 130/186 (69.89%), Postives = 137/186 (73.66%), Query Frame = 0 
Query:    1 MVPGQPPLPEQVEGKGXXXXXXXVFLRPVPSPLGPKGFKPPTLPQLYAAVSSPDQRGWLDALQVRLVDMVQDEMVACLDEREAAVTTRPNSLTWPEFARQAVSALLLNWAEQDAIFGDTSGAPSQSQAAQGRAARKKVGKGG-KIDPQHLSPACVWLDAQHDAKHGARFIESITGNADEPPPKKTE 185
            MVPGQPPLPEQ +GKG XXXX  VFLRPVPSPLGPKGFK PTLPQLYAAVSSP+QRGWLDALQVRLVDMVQD+MV+ LDEREAA TTRPNS                                    AAQGRAARKK+GKGG KI+P HLSPACVWLDAQHDA HGAR+IESITGNAD PPP K E
Sbjct:  299 MVPGQPPLPEQTDGKGGXXXXG-VFLRPVPSPLGPKGFKAPTLPQLYAAVSSPEQRGWLDALQVRLVDMVQDQMVSSLDEREAAATTRPNS------------------------------------AAQGRAARKKLGKGGGKIEPHHLSPACVWLDAQHDATHGARYIESITGNADNPPPAKKE 447
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1817.5239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5K5_ECTSI1.160e-9290.56Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J6B9_9PHAE8.630e-6569.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1817contigL-elsbetiae_contig1817:19000..22394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1817.5239.1mRNA_L-elsbetiae_contig1817.5239.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1817 19000..22394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1817.5239.1 ID=prot_L-elsbetiae_contig1817.5239.1|Name=mRNA_L-elsbetiae_contig1817.5239.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
MVPGQPPLPEQVEGKGGGGGGGGVFLRPVPSPLGPKGFKPPTLPQLYAAV
SSPDQRGWLDALQVRLVDMVQDEMVACLDEREAAVTTRPNSLTWPEFARQ
AVSALLLNWAEQDAIFGDTSGAPSQSQAAQGRAARKKVGKGGKIDPQHLS
PACVWLDAQHDAKHGARFIESITGNADEPPPKKTERPPPAHKNKKALGLL
SEGVEVGGDTAASVAAAGGGPAEQADPEAKPEPAVAPPPWAGAVAKKQEQ
QPTNGGMGRGAGTVWGVMASEAGAEAAASAATGLKAPPPSEAHGRSAVAA
SASALAVPEASGVGDTATPPPLLPPPPPPPAVSAEESVGLLTPARTLSGS
SARVAALAIAAEAAAKAAAAKAAAAAAAEALKAASSSGGRKGKLDPAAAG
AEG
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