prot_L-elsbetiae_contig1808.5192.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1808.5192.1
Unique Nameprot_L-elsbetiae_contig1808.5192.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length177
Homology
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BLAST of mRNA_L-elsbetiae_contig1808.5192.1 vs. uniprot
Match: A0A6H5KHL0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL0_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 8.790e-55
Identity = 136/175 (77.71%), Postives = 146/175 (83.43%), Query Frame = 0 
Query:    1 MEGLVNRLADAREACLTKSNAPPAIEGRRQVGSVMSELALNLQQQQQEQAIRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEIMTALGKLPQAEELHRRALKIRKYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGELRSASRAR----AMSKRSGGGGSWGSKEW 171
            MEGLV RLA+AREA LT SNAPPAIEGRRQVGSVMSELAL L+QQ+QEQA RAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEIMTAL KLPQAEELHRRALKIR+YT    XXXXXXXXXXXXXXXXXXXXX         AGE+RS +R+R    + S+RS    SWGSK+W
Sbjct: 2909 MEGLVIRLANAREARLTVSNAPPAIEGRRQVGSVMSELALALRQQKQEQATRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEIMTALNKLPQAEELHRRALKIRQYTLGEDXXXXXXXXXXXXXXXXXXXXXHAGDLLLRRAGEIRSPARSRGRMKSYSRRSS---SWGSKDW 3080
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BLAST of mRNA_L-elsbetiae_contig1808.5192.1 vs. uniprot
Match: A0A6H5KEH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH7_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.740e-31
Identity = 72/89 (80.90%), Postives = 77/89 (86.52%), Query Frame = 0 
Query:    1 MEGLVNRLADAREACLTKSNAPPAIEGRRQVGSVMSELALNLQQQQQEQAIRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEIMTAL 89
            MEGLV RLA+AREA LT  +APPAIE    VGSVMS+LAL L+QQ+QEQA RAFPLFRRVFLSD KILGCYHPLVAEDVVNLA IMTAL
Sbjct:  197 MEGLVIRLANAREARLTGCDAPPAIE----VGSVMSDLALALRQQKQEQATRAFPLFRRVFLSDAKILGCYHPLVAEDVVNLA-IMTAL 280
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BLAST of mRNA_L-elsbetiae_contig1808.5192.1 vs. uniprot
Match: D7G3Y1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y1_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.410e-17
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0 
Query:    1 MEGLVNRLADAREACLTKSNAPPAIEGRRQVGSVMSELALNLQQQQQEQAIRAFPLFR 58
            MEGLV RLA+AREA LT SNAPPAIEGRRQVGSVMS+LAL L+QQ+QEQA RAFPLFR
Sbjct: 2420 MEGLVIRLANAREARLTVSNAPPAIEGRRQVGSVMSDLALALRQQKQEQATRAFPLFR 2477
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1808.5192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHL0_9PHAE8.790e-5577.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KEH7_9PHAE1.740e-3180.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Y1_ECTSI1.410e-1784.48Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 81..136
e-value: 4.4E-12
score: 46.1
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 31..143
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 8..160
e-value: 6.2E-25
score: 89.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 46..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1808contigL-elsbetiae_contig1808:369..3729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1808.5192.1mRNA_L-elsbetiae_contig1808.5192.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1808 259..3729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1808.5192.1 ID=prot_L-elsbetiae_contig1808.5192.1|Name=mRNA_L-elsbetiae_contig1808.5192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MEGLVNRLADAREACLTKSNAPPAIEGRRQVGSVMSELALNLQQQQQEQA
IRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEIMTALGKLPQAEELHR
RALKIRKYTLGEDHPSTVASLSHLAVTLRAQGKTRKGDSLLRHAGELRSA
SRARAMSKRSGGGGSWGSKEWEGGDED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf