prot_L-elsbetiae_contig1807.5189.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1807.5189.1
Unique Nameprot_L-elsbetiae_contig1807.5189.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length266
Homology
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BLAST of mRNA_L-elsbetiae_contig1807.5189.1 vs. uniprot
Match: A0A6H5KY95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY95_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 1.570e-85
Identity = 188/274 (68.61%), Postives = 203/274 (74.09%), Query Frame = 0 
Query:    1 MKPSASLIGLASVAAYLVLGTHGFVAP-GSLTAGGVISRTHDVSSSIISCGRGSRSVFPASDHASPRHRNEHSSLTMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG------QLGDVLEGDRGVEELFSDDWSDMPANTGMVKSNVPLPDITEFKPTRRAETTLEQREKKTARGLVVGAAD----DAVPASRLSGFKSKLPPIVDREEERRKKSAAERFEEGPIVKGLKTLTWFSICTLVLWEVYINSPWFTPPTGPP 263
            MKPSASL+ LASVA  L+ GTHGFVAP  +L AGGV S THDV SS     R S S      H S R           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AG      +LGDVLEGDR VE LF+DDWS MPANTGM KSNVPLPDI+EFKP+RRAE+TLEQREKK+A GLVVGA D    DAVPASRL+GF+SKL PIVDREEERR+K+AAERFEEGPIV+GLKT TWFSICTLVLWE+YINSPWF  P  PP
Sbjct:   26 MKPSASLLALASVATCLLEGTHGFVAPINNLAAGGVTSGTHDVCSSAAIYSRSSGSSHRHLLHRSSRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPPKRPAADSGAGAGAEGGVGELGDVLEGDRSVEALFTDDWSGMPANTGMTKSNVPLPDISEFKPSRRAESTLEQREKKSAVGLVVGAGDGDDDDAVPASRLAGFESKLTPIVDREEERRQKNAAERFEEGPIVRGLKTATWFSICTLVLWEIYINSPWFHAPESPP 299
[Close]
BLAST of mRNA_L-elsbetiae_contig1807.5189.1 vs. uniprot
Match: D8LB46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB46_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.480e-75
Identity = 120/149 (80.54%), Postives = 129/149 (86.58%), Query Frame = 0 
Query:  121 GQLGDVLEGDRGVEELFSDDWSDMPANTGMVKSNVPLPDITEFKPTRRAETTLEQREKKTARGLVVGAAD------DAVPASRLSGFKSKLPPIVDREEERRKKSAAERFEEGPIVKGLKTLTWFSICTLVLWEVYINSPWFTPPTGPP 263
            G+LGDVLEGDR VE LFSDDWS MPANTGM KSNVPLPDI+EFKP+RRAE+TLEQREKK+A GLVVG  D      DAVPASRL+GF+SKL PIVDREEE RKK+AAERFEEGPIV+GLKT TWFSICTLVLWEVYINSPWF  P  PP
Sbjct:   58 GELGDVLEGDRSVEALFSDDWSGMPANTGMTKSNVPLPDISEFKPSRRAESTLEQREKKSAVGLVVGPGDGSDDDGDAVPASRLAGFESKLTPIVDREEEWRKKNAAERFEEGPIVRGLKTATWFSICTLVLWEVYINSPWFHAPESPP 206
[Close]
BLAST of mRNA_L-elsbetiae_contig1807.5189.1 vs. uniprot
Match: A0A835YVC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.730e-14
Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 0 
Query:  133 VEELFSDDWSDMPANTGMVKSNVPLPDITEFKPTRRAETTLEQREKKTARGLVVGAADDAVPASRLSGFKSKLPPIVDREEERRKKSAAERFEEGPIVKGLKTLTWFSICTLVLWEVYINSPWFTPP 259
            + +LF DDWS M A  GM        D  E  P++  +T L   +K                      F+S+L PI   + E R+ +AAERF+EG +VK +K  TWF++ +LV WE+Y++SP+F PP
Sbjct:   75 LADLFVDDWSGMQAPRGMKDKK----DAKEPLPSKDGKTELPDLKK----------------------FESQLTPISGMKPEVRELTAAERFQEGNVVKAIKAATWFALLSLVAWEIYLHSPFFKPP 175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1807.5189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KY95_9PHAE1.570e-8568.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB46_ECTSI2.480e-7580.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVC2_9STRA6.730e-1436.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.589
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1807contigL-elsbetiae_contig1807:11253..14848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1807.5189.1mRNA_L-elsbetiae_contig1807.5189.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1807 9590..14848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1807.5189.1 ID=prot_L-elsbetiae_contig1807.5189.1|Name=mRNA_L-elsbetiae_contig1807.5189.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp
MKPSASLIGLASVAAYLVLGTHGFVAPGSLTAGGVISRTHDVSSSIISCG
RGSRSVFPASDHASPRHRNEHSSLTMMAAGKKRRRRKGGKGSATAAASGV
STAPKKQPASAAPVVAGGGAGQLGDVLEGDRGVEELFSDDWSDMPANTGM
VKSNVPLPDITEFKPTRRAETTLEQREKKTARGLVVGAADDAVPASRLSG
FKSKLPPIVDREEERRKKSAAERFEEGPIVKGLKTLTWFSICTLVLWEVY
INSPWFTPPTGPPVL*
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