prot_L-elsbetiae_contig1807.5187.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1807.5187.1
Unique Nameprot_L-elsbetiae_contig1807.5187.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
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BLAST of mRNA_L-elsbetiae_contig1807.5187.1 vs. uniprot
Match: D8LB47_ECTSI (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB47_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.170e-21
Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 0 
Query:    2 DQVSIGSFTESEAEGSRLESGAVRGGGGRDAENAHDYSSLAECTPRRQRVGSRE-DLGGFYPPLQVANIAKREPQGLHLSTLQRSTLHWMLWREGGDE 98
            +Q SI SF+ESE E S+  +GA   G   D       SSLAE TPRR+  G+R+  LGGFYPPLQVAN+A +  +G  LSTLQ+STL WMLWRE G++
Sbjct:  996 EQASIDSFSESEPERSKPGAGAKEAGADEDMTGD---SSLAEGTPRRRGAGARDRSLGGFYPPLQVANLANKAREGSTLSTLQKSTLQWMLWRERGEK 1090
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BLAST of mRNA_L-elsbetiae_contig1807.5187.1 vs. uniprot
Match: A0A6H5KIY1_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.800e-20
Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 0 
Query:    2 DQVSIGSFTESEAEGSRLESGAVRGGGGRDAENAHDYSSLAECTPRRQRVGSRED-LGGFYPPLQVANIAKREPQGLHLSTLQRSTLHWMLWREGGDE 98
            +Q SI SF+ESE   S+    A   G   D     D SSLAE TPRR+  G+R+  LGGFYPPLQVAN+A +  +GL LSTLQ STL WMLWRE G++
Sbjct:  993 EQASIDSFSESEPGRSKPGVSATEAGADEDMT---DGSSLAEGTPRRRGAGARDCYLGGFYPPLQVANLASKAREGLTLSTLQESTLQWMLWRERGEK 1087
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1807.5187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB47_ECTSI3.170e-2155.10SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KIY1_9PHAE2.800e-2055.10SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1807contigL-elsbetiae_contig1807:3619..4332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1807.5187.1mRNA_L-elsbetiae_contig1807.5187.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1807 3613..4332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1807.5187.1 ID=prot_L-elsbetiae_contig1807.5187.1|Name=mRNA_L-elsbetiae_contig1807.5187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
MDQVSIGSFTESEAEGSRLESGAVRGGGGRDAENAHDYSSLAECTPRRQR
VGSREDLGGFYPPLQVANIAKREPQGLHLSTLQRSTLHWMLWREGGDES
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