prot_L-elsbetiae_contig179.5108.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig179.5108.1
Unique Nameprot_L-elsbetiae_contig179.5108.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length565
Homology
BLAST of mRNA_L-elsbetiae_contig179.5108.1 vs. uniprot
Match: A0A6H5KL28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL28_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 5.080e-115
Identity = 287/513 (55.95%), Postives = 323/513 (62.96%), Query Frame = 0
Query:   50 SRAHPSLARVAPAFAARASSSL-NKRSGYER-----RSSLVAVRAARTGGGGRHR--RGLSS-VTMSAAGWGRGRREQPW----MVGSGAEAGXXXXXXXXXRPMVVGHRRRYLTVSATPQTGGGVRRFEAAELLQMSYRDLQALAKDNNVRANQTGKAIVNDLVALWGGAAPDGGGRNGDEEDADVAEATVGEAGSDWVAGVLDEDIMAGVDLSKYDDDGDXXXXXEDYDQAVKRATSGKFSVTEMEGLKGGVDQGDGWVTFKLGKGDALRLDGGXXXXXXXXXXXXXXXXXXXXXXGGSDAMDARIRDAESSRLRLSPEMMASSAEDFGFGRDTADLQKLTITVPKGCCPGCGSKFQSEDAADPGYLQLDKLDRLLGNEGGPAAVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEADMDPEAWLEAXXXXXXXXXXXXXXXXEEGGSNESGGGDREEESGSREWVEGALSSPAASLAGRVGGLGRASRDSKALEGRELTPSSSSAAA 549
            SRA    A V PAFAAR SSSL +KR+  ER     RSSLVAV   RT   GR    RG+S+ V+MSA  W    + QPW    + G+ + AG          P  VG RRR L +SA    GG  RRF++AELL+M YRDLQ LAK+N+VRANQ G+AIVNDL+AL  GA P    +  D    DVA   + E+ SDWVAGVLDEDIMAGVDL    +D       E Y QAVKRATSGKF+ T+MEGLKGGVD+GDGWVTFKLGKGD+L LDG         XXXXXXXXXXXXXX   D MDARIRDAE+SR RLSPEMMASSAEDFGFGRD ADL+KLTITVP GCCPGCGSKFQS+D A PG+LQLDKLD LLGNEG  A VT A                              EADMDPEAWLEA        XXXXX   E+    E  GGD        E V+ +  SPA    G  GGLGRASRD+  L GR  TPS+++AAA
Sbjct:  112 SRASSLAAGVLPAFAARVSSSLASKRNHGEREVGSGRSSLVAV-GRRTSSRGRRTNDRGVSTAVSMSAEVW----KIQPWGLGLLGGAFSRAGGW--------PPAVGDRRRTLAISAATTEGG--RRFDSAELLKMGYRDLQKLAKENDVRANQAGEAIVNDLLAL--GANP---AKGPDSNGEDVAVPAMRES-SDWVAGVLDEDIMAGVDLEADGEDDADGEDSETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDSLGLDG-----EGDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMMASSAEDFGFGRDAADLEKLTITVPTGCCPGCGSKFQSDDPASPGFLQLDKLDDLLGNEGVAATVTTAEDTREAAAVATD------------------EADMDPEAWLEAQSDINTDLXXXXXLADED---XEDDGGDPR-----GELVDRSYGSPA----GGGGGLGRASRDTAVLAGR--TPSTAAAAA 566          
BLAST of mRNA_L-elsbetiae_contig179.5108.1 vs. uniprot
Match: D8LQR2_ECTSI (Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR2_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 6.240e-101
Identity = 218/369 (59.08%), Postives = 236/369 (63.96%), Query Frame = 0
Query:  173 MSYRDLQALAKDNNVRANQTGKAIVNDLVALWGGAAPDGGGRNGDEEDADVAEATVGEAGSDWVAGVLDEDIMAGVDLSKYDDDGDXXXXXEDYDQAVKRATSGKFSVTEMEGLKGGVDQGDGWVTFKLGKGDALRLDGGXXXXXXXXXXXXXXXXXXXXXXGGSDAMDARIRDAESSRLRLSPEMMASSAEDFGFGRDTADLQKLTITVPKGCCPGCGSKFQSEDAADPGYLQLDKLDRLLGNEGGPAAVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEADMDPEAWLEAXXXXXXXXXXXXXXXXEEGGSNESGGGDREEESGSREWVEGALSSPAASLAGRVGGLGRASRDSKALEGRELT 541
            M YRDLQ LAK+N++RANQ G+AI+NDLVAL  GA P    R  D    DVA    GE+ SDWVAGVLDEDIMAGVDL    +D       E Y QAVKRATSGKF+ T+MEGLKGGVD+GDGWVTFKLGKGDAL LDG         XXXXXXXXXXXXXX   D MDARIRDAE+SR RLSPEM+ASSAEDFGFGRD ADL+KLTITVP GCCPGCGSKFQSED A PG+LQLDKLD LLGNE G A V  A                              EADMDPEAWLEA                   G  +  GGD        EWVEG+ +SPA    G  GGLGRASRD+  L GR  T
Sbjct:    1 MGYRDLQKLAKENDIRANQAGEAIINDLVAL--GANP---ARGPDSNGEDVAVPATGES-SDWVAGVLDEDIMAGVDLEADGEDDADGEDSETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDALGLDG-----EGDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMIASSAEDFGFGRDAADLEKLTITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNEVGAATVMTAEDTREAAAVTTD------------------EADMDPEAWLEAQSDINTDLDFDLDV-----GDEDDDGGDPR-----GEWVEGSYASPAGVPTGGGGGLGRASRDTAVLAGRTPT 330          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig179.5108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL28_9PHAE5.080e-11555.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQR2_ECTSI6.240e-10159.08Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..565
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig179contigL-elsbetiae_contig179:673..15986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig179.5108.1mRNA_L-elsbetiae_contig179.5108.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig179 673..16087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig179.5108.1 ID=prot_L-elsbetiae_contig179.5108.1|Name=mRNA_L-elsbetiae_contig179.5108.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=565bp
MRAACRKQQQQSSRQPRNSSSSTATACLVTLLSGGRGSMALSLPAYSSRS
RAHPSLARVAPAFAARASSSLNKRSGYERRSSLVAVRAARTGGGGRHRRG
LSSVTMSAAGWGRGRREQPWMVGSGAEAGGGFFLGGGGRPMVVGHRRRYL
TVSATPQTGGGVRRFEAAELLQMSYRDLQALAKDNNVRANQTGKAIVNDL
VALWGGAAPDGGGRNGDEEDADVAEATVGEAGSDWVAGVLDEDIMAGVDL
SKYDDDGDDDGDEEDYDQAVKRATSGKFSVTEMEGLKGGVDQGDGWVTFK
LGKGDALRLDGGGDDYDEDDDDDDEEDEDDDDDQGGSDAMDARIRDAESS
RLRLSPEMMASSAEDFGFGRDTADLQKLTITVPKGCCPGCGSKFQSEDAA
DPGYLQLDKLDRLLGNEGGPAAVTAAAAAAAAAAAEGATTTTASATAAAA
AGGSEAEADMDPEAWLEAQSDINTDLDFDLDLDLEEGGSNESGGGDREEE
SGSREWVEGALSSPAASLAGRVGGLGRASRDSKALEGRELTPSSSSAAAA
VAGTTGDGAAELLTG
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