prot_L-elsbetiae_contig962.18596.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig962.18596.1
Unique Nameprot_L-elsbetiae_contig962.18596.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length382
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig962.18596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 326..381
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 299..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 228..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..298
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..325
NoneNo IPR availableTMHMMTMhelixcoord: 278..300
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 307..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig962contigL-elsbetiae_contig962:8513..9658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig962.18596.1mRNA_L-elsbetiae_contig962.18596.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig962 8513..9658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig962.18596.1 ID=prot_L-elsbetiae_contig962.18596.1|Name=mRNA_L-elsbetiae_contig962.18596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=382bp
PPASNAIDTGTAPFLSMPPLAAKPLPLAAPTAEVLFGVDLPFAPAATLEP
SAPATDTTAVVGVISPPLGETPALLRGVFAVGLFEGAGAAGLAAGAGAGV
AARIRGTVGADRTGAAGITGTVAPTPKPVTAGLPPLPPGPSTLCQTLPPK
APTIMLPLGVADGACPSPLTTPRATLLKTPTPPFVLQSWPAAAPAATTAA
VAAVALAFAAVLSASAASAVSVALLALRLFFLDRFPGWEGAPTARPGATL
AATDASNLPLSLSSALPPANGPSSFERLTLWPAAASATSIAALIAIAFDL
AAVAFALAVVASAFAASAFAFAASATSAISFAIHRCFLDTDISFPRGALI
AWSPYSVALCPARHHRCIDLDFVVVSPPSSK*
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