prot_L-elsbetiae_contig9569.18551.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9569.18551.1
Unique Nameprot_L-elsbetiae_contig9569.18551.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 2.610e-141
Identity = 215/275 (78.18%), Postives = 224/275 (81.45%), Query Frame = 0
Query:    1 MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIQALGIMGAPGVPGRASSSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQEYVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHLNSKMVVPNHALRNSIEAFRRERGY 275
            MADDQPCANL QALDRYASIAPAV+LSGPTSFAPLIRKAIEIVQDT EYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIM+GVGEGPW+TCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAI+ALGIM   G PG   +SVAA                           XXX             VPQ+++CPLTLEVMIDPVVCEDGHSYERG +EAWLRNHDTSPMSNAHLNSKM VPNHALRNSIEAFRRERGY
Sbjct:  170 MADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMVGVGEGPWETCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIRALGIMEGAGAPGSGPTSVAASVAGGGVSGSAPSMAPVNMVMSGSAPPXXXPSELDEDEG----VPQDFICPLTLEVMIDPVVCEDGHSYERGALEAWLRNHDTSPMSNAHLNSKMAVPNHALRNSIEAFRRERGY 440          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A250WT19_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT19_9CHLO)

HSP 1 Score: 179 bits (453), Expect = 1.170e-49
Identity = 114/305 (37.38%), Postives = 151/305 (49.51%), Query Frame = 0
Query:   16 RYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDAEA-------LALSALAEVPDQYRAIQALGIMGA-----PGV-----PGRASSSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------VPQEYVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHLNSKMVVPNHALRNSIEAFRRE 272
            RY  +AP V L+GPTSFAP I +A+  V D+G +YH LVIIADGQVT+            ER+T+ AI +AS  PLSI+M+GVG+GPWD  REFD+R+P RR+DNF+FV    +    +          AL  L E+P+QY+ IQ LG++G       G+     PG  S   AA                                                              P  ++CP+T E+M DPV+  DG+SY+R  I  WL+ H TSPM+N  L  K + PNHALR+SI  +  E
Sbjct:  138 RYRELAPHVKLAGPTSFAPAIYQAMRTVCDSGGQYHILVIIADGQVTRPTDTPPNYCSKQERETIDAIVNASELPLSIVMVGVGDGPWDVMREFDDRIPQRRWDNFQFVNFTEIAAAYSSMPQRMETIFALRTLMEIPEQYKIIQKLGLLGRRTARIAGIKVMDPPGPVSGYGAAVQPSVAPPQQANFVNPSPVAAAGPSLLPEPGNTSIQNPGSASMRALFTKGSSMLRESTPEGPPPMFICPITQEIMKDPVMAADGYSYDRSSITQWLQTHHTSPMTNTQLPHKTLTPNHALRSSIMEYLEE 442          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A8J4F4Y0_9CHLO (U-box domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F4Y0_9CHLO)

HSP 1 Score: 174 bits (440), Expect = 1.590e-47
Identity = 152/329 (46.20%), Postives = 201/329 (61.09%), Query Frame = 0
Query:    4 DQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDA------EAL-ALSALAEVPDQYRAIQALGIMGA-------------------PGVP-----GRASSSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----------PQE---YVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHL-NSKMVVPNHALRNSIEAFRRERG 274
            D+PC  L Q L RY  + P V ++GPTSFAP IR+A  IV+ +G +YH L+++ADGQV++            E+DT+ AI +AS+ PLSIIM+GVG+GPWD  ++FD+ LP R++DNF+FV    +    +      EAL AL AL E+P+QY+ IQ LG+M                     P VP     G  S +  +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             PQ    +VCP+T +VM DPV+  DG++YER  I  WL+N   SPM+NA +     ++PNHALR+SI  ++++ G
Sbjct:  144 DKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQACRIVEQSGYQYHILLLVADGQVSRSSDLLPGQYSDQEQDTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTDVMANSSGNLARREALFALRALMEIPEQYQMIQRLGLMSRNSIVRTRAPHRKPINPVLDPPVPPSIMNGLGSGASVSKPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSTGARTAEDRKGPQPDSMFVCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDHG 472          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A8J4C8P0_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8P0_9CHLO)

HSP 1 Score: 174 bits (440), Expect = 1.620e-47
Identity = 115/329 (34.95%), Postives = 163/329 (49.54%), Query Frame = 0
Query:    4 DQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDA------EAL-ALSALAEVPDQYRAIQALGIMGA-------------------PGVPGRASSSVA---------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQE---YVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHL-NSKMVVPNHALRNSIEAFRRERG 274
            D+PC  L Q L RY  + P V ++GPTSFAP IR+A  IV+ +G +YH L+++ADGQV++            E DT+ AI +AS+ PLSIIM+GVG+GPWD  ++FD+ LP R++DNF+FV    +    +      EAL AL AL E+P+QY+ IQ LG+M                     P VP    S +                A                                            PQ    ++CP+T +VM DPV+  DG++YER  I  WL+N   SPM+NA +     ++PNHALR+SI  ++++ G
Sbjct:  144 DKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQASRIVEQSGYQYHILLLVADGQVSRSSDLLPGQHSDQEADTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTEVMASTSGNVERREALFALRALMEIPEQYQMIQRLGLMSTNSIVRARAPRRKPANPVLDPPVPPSIMSGLGSGGSVPKQLTKTTPIAEPLSAAAVGVITGGGKSGAQAGGDGLGVGFGGSTRVGTTDDRKGPQPDPMFLCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDNG 472          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A7D9LQJ9_PARCT (E3 ubiquitin- ligase RGLG4-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LQJ9_PARCT)

HSP 1 Score: 169 bits (427), Expect = 3.420e-47
Identity = 86/153 (56.21%), Postives = 112/153 (73.20%), Query Frame = 0
Query:    1 MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERD--TVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYG----DAEA-LALSALAEVPDQYRAIQALGIMG 146
            + D+ PC  + + L RY     +V+LSGPTSFAP+IRKAIEIVQ TG+YH L+IIADG+V  E D  T  AI DASNYPLSI+++GVG+GPW+   E+D++LP RR+DNF+FVE    K      D EA  A+ AL E+PDQYRAI++LG++G
Sbjct:  104 LIDESPCKGVDEVLTRYTRTVGSVSLSGPTSFAPIIRKAIEIVQQTGKYHVLLIIADGRVENEHDLETRSAIVDASNYPLSIVLVGVGDGPWEVMHEYDDKLPQRRFDNFQFVEFVEKKNSRFSRDIEAEFAVQALMEIPDQYRAIRSLGLLG 256          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A6A4Y445_9STRA (Copine domain-containing protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y445_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.260e-47
Identity = 78/138 (56.52%), Postives = 107/138 (77.54%), Query Frame = 0
Query:   12 QALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRR-LKYGDAE---ALALSALAEVPDQYRAIQALGIM 145
            Q L+RY  I P++ LSGPT+FAP+IR+ IEIV+ T +YH LVI+ADGQVT ER+T  AI +ASNYP+SIIM+GVG+GPW+   EFD+RLP RR+DN++FVE+ + L++         A +AL E+PDQY+AI+ LG++
Sbjct:    3 QVLERYTQITPSIQLSGPTNFAPVIRETIEIVKRTLQYHILVIVADGQVTSERETQDAIVEASNYPISIIMVGVGDGPWEMMEEFDDRLPRRRFDNYQFVEYNKVLRFNQRNPDVGFATAALMEIPDQYKAIRQLGLL 140          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A835WNU3_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WNU3_9CHLO)

HSP 1 Score: 171 bits (433), Expect = 3.450e-46
Identity = 120/354 (33.90%), Postives = 166/354 (46.89%), Query Frame = 0
Query:    1 MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLK---YGDA---EAL-ALSALAEVPDQYRAIQALGIMGA---------------------PGVPGRASSSVA-------------------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQE-YVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHL-NSKMVVPNHALRNSIEAFRRERG 274
            +ADDQPC  L QAL RY  + P + ++GPTSFAP IR+A  IV+ +G +YH L+++ADGQV++            E+DT+ AI +AS+ PLSIIM+GVG+GPWD  ++FD+ LP R +DNF+FV    L     GD    EAL AL AL E+P+QY AIQ +GI+G                      P VP    +  A                                     A                                           VP   +VCP+T +VM DPV+  DG++YER  I  WL     SP++N  +    +++PNH LR+SI  +R++ G
Sbjct:  156 LADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQASRIVEASGGQYHILLLVADGQVSRPSGLPDNVKSEQEQDTIDAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMSSTQGDRSRREALFALRALMEIPEQYNAIQRMGILGRTAAAQVARGRTQRRPGNPPLDPPVPPHLMAGTASGPSTTTTCGPAGGAXXXXXXXXXXXXXXXXXXXXSGAGDAAAAPSKGTQSARTSGTGYGVAAGGGGPTGPTPMAPAAGGPVPDPMFVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQRMPGGNVLIPNHNLRSSIMEWRQKHG 509          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A8B8EAA8_CRAVI (E3 ubiquitin-protein ligase RGLG4-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EAA8_CRAVI)

HSP 1 Score: 166 bits (421), Expect = 4.350e-46
Identity = 83/149 (55.70%), Postives = 109/149 (73.15%), Query Frame = 0
Query:    1 MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHR----RLKYGDAEALALSALAEVPDQYRAIQALGIM 145
            M+D  PC   G+ LD+Y+ IA  V  SGPT+FAPLI KAIEIV+ T +YH L+IIADGQV +E  TV AI +ASNYPLSI+++GVG+GPWDT  EFD+ LP R++DN +FV++     ++K+ DA   AL AL E+P QYR I+ LG +
Sbjct:  168 MSDGSPCKGFGEVLDKYSDIATRVVFSGPTNFAPLIHKAIEIVKTTKKYHILIIIADGQVNEEERTVEAIVEASNYPLSIVVVGVGDGPWDTMDEFDDCLPNRKFDNCQFVDYHAVTSKVKHPDAN-FALHALMEIPLQYRTIKKLGYL 315          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A485L0K7_9STRA (Aste57867_14165 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0K7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.270e-45
Identity = 80/144 (55.56%), Postives = 107/144 (74.31%), Query Frame = 0
Query:    6 PCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDAEA----LALSALAEVPDQYRAIQALGIM 145
            PC    Q L RYA + P++ LSGPT+FAP+IR+ I+IV+ T EYH LVI+ADGQV+ ER+T  AI +ASNY +SIIM+GVG+GPWD   EFD+ LP R++DNF+FVE+ RL   +  A     A +AL EVPDQ++AI+ LG++
Sbjct:  137 PCQGFAQVLQRYAELTPSIQLSGPTNFAPVIRETIDIVKRTREYHILVIVADGQVSNERETRDAIVEASNYAISIIMVGVGDGPWDMMEEFDDGLPRRQFDNFQFVEYNRLLRLNPRAPEVGFATAALMEVPDQFKAIRRLGLL 280          
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: UPI00148A77D2 (E3 ubiquitin-protein ligase RGLG4-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A77D2)

HSP 1 Score: 164 bits (416), Expect = 2.280e-45
Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 0
Query:    1 MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHR----RLKYGDAEALALSALAEVPDQYRAIQALG 143
            M+D  PC    + LDRY+ IA  V  SGPT+FAPL+ KAIEIV+ T +YH L+I+ADGQV +E+ TV AI +ASN+PLSI+++GVG+GPWDT  EFD+ LP R++DNF+FV++     ++K+ DA   AL AL E+P QY+ I+ LG
Sbjct:  166 MSDGSPCKGFAEVLDRYSDIATKVTFSGPTNFAPLVYKAIEIVKTTQKYHILIIVADGQVNEEQQTVEAIVEASNHPLSIVVVGVGDGPWDTMDEFDDCLPNRKFDNFQFVDYHAVTSKVKHPDAN-FALHALMEIPLQYKTIRKLG 311          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB4_ECTSI2.610e-14178.18U-box domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A250WT19_9CHLO1.170e-4937.38U-box domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A8J4F4Y0_9CHLO1.590e-4746.20U-box domain-containing protein n=2 Tax=Volvox afr... [more]
A0A8J4C8P0_9CHLO1.620e-4734.95U-box domain-containing protein n=1 Tax=Volvox ret... [more]
A0A7D9LQJ9_PARCT3.420e-4756.21E3 ubiquitin- ligase RGLG4-like (Fragment) n=2 Tax... [more]
A0A6A4Y445_9STRA4.260e-4756.52Copine domain-containing protein (Fragment) n=2 Ta... [more]
A0A835WNU3_9CHLO3.450e-4633.90U-box domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A8B8EAA8_CRAVI4.350e-4655.70E3 ubiquitin-protein ligase RGLG4-like n=1 Tax=Cra... [more]
A0A485L0K7_9STRA1.270e-4555.56Aste57867_14165 protein n=1 Tax=Aphanomyces stella... [more]
UPI00148A77D22.280e-4554.42E3 ubiquitin-protein ligase RGLG4-like n=1 Tax=Cra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 207..269
e-value: 6.9E-21
score: 85.4
IPR003613U box domainPFAMPF04564U-boxcoord: 204..273
e-value: 7.1E-19
score: 67.8
IPR003613U box domainPROSITEPS51698U_BOXcoord: 203..275
score: 30.431
IPR010734CopinePFAMPF07002Copinecoord: 3..142
e-value: 1.1E-39
score: 136.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 189..274
e-value: 1.4E-28
score: 100.8
NoneNo IPR availablePANTHERPTHR45751:SF11COPINE FAMILY PROTEIN 1coord: 3..227
NoneNo IPR availablePANTHERPTHR45751FAMILY NOT NAMEDcoord: 3..227
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 197..274
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 17..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9569contigL-elsbetiae_contig9569:3728..6510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9569.18551.1mRNA_L-elsbetiae_contig9569.18551.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9569 2708..6626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9569.18551.1 ID=prot_L-elsbetiae_contig9569.18551.1|Name=mRNA_L-elsbetiae_contig9569.18551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYH
CLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRL
PGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIQALGIMGAPGV
PGRASSSVAASVAVGGIAGEVPGMAPMQATMNVPMVASAPPSAPSSDMDM
DEDVPQEYVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAH
LNSKMVVPNHALRNSIEAFRRERGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR010734Copine
IPR013083Znf_RING/FYVE/PHD
IPR036465vWFA_dom_sf