mRNA_L-elsbetiae_contig9569.18551.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI) HSP 1 Score: 491 bits (1263), Expect = 7.740e-166 Identity = 249/313 (79.55%), Postives = 262/313 (83.71%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIQALGIMGAPGVPGRASSSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQEYVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHLNSKMVVPNHALRNSIEAFRRERGY 941 QEVL+GVGRGLGPLNRA+KIWCYGFGDE+TRDE+VFCFMADDQPCANL QALDRYASIAPAV+LSGPTSFAPLIRKAIEIVQDT EYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIM+GVGEGPW+TCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAI+ALGIM G PG +SVAA XXX VPQ+++CPLTLEVMIDPVVCEDGHSYERG +EAWLRNHDTSPMSNAHLNSKM VPNHALRNSIEAFRRERGY Sbjct: 132 QEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMVGVGEGPWETCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIRALGIMEGAGAPGSGPTSVAASVAGGGVSGSAPSMAPVNMVMSGSAPPXXXPSELDEDEG----VPQDFICPLTLEVMIDPVVCEDGHSYERGALEAWLRNHDTSPMSNAHLNSKMAVPNHALRNSIEAFRRERGY 440
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A8J4F4Y0_9CHLO (U-box domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F4Y0_9CHLO) HSP 1 Score: 206 bits (523), Expect = 1.410e-55 Identity = 168/370 (45.41%), Postives = 224/370 (60.54%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDA------EAL-ALSALAEVPDQYRAIQALGIMGA-------------------PGVP-----GRASSSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----------PQE---YVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHL-NSKMVVPNHALRNSIEAFRRERG 938 ++ + +GR L + I CYGFGD +T D SVF F+ D+PC L Q L RY + P V ++GPTSFAP IR+A IV+ +G +YH L+++ADGQV++ E+DT+ AI +AS+ PLSIIM+GVG+GPWD ++FD+ LP R++DNF+FV + + EAL AL AL E+P+QY+ IQ LG+M P VP G S + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PQ +VCP+T +VM DPV+ DG++YER I WL+N SPM+NA + ++PNHALR+SI ++++ G Sbjct: 103 EDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQACRIVEQSGYQYHILLLVADGQVSRSSDLLPGQYSDQEQDTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTDVMANSSGNLARREALFALRALMEIPEQYQMIQRLGLMSRNSIVRTRAPHRKPINPVLDPPVPPSIMNGLGSGASVSKPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSTGARTAEDRKGPQPDSMFVCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDHG 472
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A8J4C8P0_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8P0_9CHLO) HSP 1 Score: 206 bits (523), Expect = 1.440e-55 Identity = 131/370 (35.41%), Postives = 186/370 (50.27%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDA------EAL-ALSALAEVPDQYRAIQALGIMGA-------------------PGVPGRASSSVA---------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQE---YVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHL-NSKMVVPNHALRNSIEAFRRERG 938 ++ + +GR L + I CYGFGD +T D SVF F+ D+PC L Q L RY + P V ++GPTSFAP IR+A IV+ +G +YH L+++ADGQV++ E DT+ AI +AS+ PLSIIM+GVG+GPWD ++FD+ LP R++DNF+FV + + EAL AL AL E+P+QY+ IQ LG+M P VP S + A PQ ++CP+T +VM DPV+ DG++YER I WL+N SPM+NA + ++PNHALR+SI ++++ G Sbjct: 103 EDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQASRIVEQSGYQYHILLLVADGQVSRSSDLLPGQHSDQEADTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTEVMASTSGNVERREALFALRALMEIPEQYQMIQRLGLMSTNSIVRARAPRRKPANPVLDPPVPPSIMSGLGSGGSVPKQLTKTTPIAEPLSAAAVGVITGGGKSGAQAGGDGLGVGFGGSTRVGTTDDRKGPQPDPMFLCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDNG 472
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A835WNU3_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WNU3_9CHLO) HSP 1 Score: 203 bits (516), Expect = 3.330e-54 Identity = 137/392 (34.95%), Postives = 188/392 (47.96%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLK---YGDA---EAL-ALSALAEVPDQYRAIQALGIMGA---------------------PGVPGRASSSVA-------------------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQE-YVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHL-NSKMVVPNHALRNSIEAFRRERG 938 +E + +GR L + I CYGFGD +T D SVF F+ADDQPC L QAL RY + P + ++GPTSFAP IR+A IV+ +G +YH L+++ADGQV++ E+DT+ AI +AS+ PLSIIM+GVG+GPWD ++FD+ LP R +DNF+FV L GD EAL AL AL E+P+QY AIQ +GI+G P VP + A A VP +VCP+T +VM DPV+ DG++YER I WL SP++N + +++PNH LR+SI +R++ G Sbjct: 118 EEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQASRIVEASGGQYHILLLVADGQVSRPSGLPDNVKSEQEQDTIDAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMSSTQGDRSRREALFALRALMEIPEQYNAIQRMGILGRTAAAQVARGRTQRRPGNPPLDPPVPPHLMAGTASGPSTTTTCGPAGGAXXXXXXXXXXXXXXXXXXXXSGAGDAAAAPSKGTQSARTSGTGYGVAAGGGGPTGPTPMAPAAGGPVPDPMFVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQRMPGGNVLIPNHNLRSSIMEWRQKHG 509
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: UPI00106C93F7 (E3 ubiquitin-protein ligase RGLG5-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C93F7) HSP 1 Score: 196 bits (499), Expect = 2.690e-53 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERD--TVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYG----DAEA-LALSALAEVPDQYRAIQALGIMG 554 Q V++ +G GL L+ I +GFGDE T+D SVF M D+ PC + L RY +VALSGPTSFAP+IRK+I+IVQ TG+YH L+IIADG+V E+D T AI +ASNYPLSI+++GVG+GPW+ E+D++LP RR+DNF+FVE K DAE A+ AL E+PDQYRAI++LG++G Sbjct: 133 QRVIRAIGEGLQDLDEDHLIPVFGFGDERTKDHSVFSLM-DESPCKGVEDVLARYTRTVGSVALSGPTSFAPIIRKSIQIVQQTGKYHVLLIIADGRVENEQDFDTRAAIVEASNYPLSIVLVGVGDGPWEVMHEYDDKLPQRRFDNFQFVEFLEKKSSRFSRDAEEDFAVQALMEIPDQYRAIRSLGLLG 322
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A7D9LQJ9_PARCT (E3 ubiquitin- ligase RGLG4-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LQJ9_PARCT) HSP 1 Score: 193 bits (491), Expect = 8.630e-53 Identity = 101/191 (52.88%), Postives = 133/191 (69.63%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERD--TVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYG----DAEA-LALSALAEVPDQYRAIQALGIMG 554 Q V++ +G L N + I YGFGD+ T+ SVF + D+ PC + + L RY +V+LSGPTSFAP+IRKAIEIVQ TG+YH L+IIADG+V E D T AI DASNYPLSI+++GVG+GPW+ E+D++LP RR+DNF+FVE K D EA A+ AL E+PDQYRAI++LG++G Sbjct: 67 QRVIRAIGETLQEFNEDNLIPVYGFGDDRTKGHSVFPLI-DESPCKGVDEVLTRYTRTVGSVSLSGPTSFAPIIRKAIEIVQQTGKYHVLLIIADGRVENEHDLETRSAIVDASNYPLSIVLVGVGDGPWEVMHEYDDKLPQRRFDNFQFVEFVEKKNSRFSRDIEAEFAVQALMEIPDQYRAIRSLGLLG 256
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A250WT19_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT19_9CHLO) HSP 1 Score: 196 bits (498), Expect = 2.750e-52 Identity = 128/352 (36.36%), Postives = 169/352 (48.01%), Query Frame = 3 Query: 21 VGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTG-EYHCLVIIADGQVTK------------ERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLKYGDAEA-------LALSALAEVPDQYRAIQALGIMGA-----PGV-----PGRASSSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------VPQEYVCPLTLEVMIDPVVCEDGHSYERGGIEAWLRNHDTSPMSNAHLNSKMVVPNHALRNSIEAFRRE 932 + R L + I +GFGD +T D VF F P L RY +AP V L+GPTSFAP I +A+ V D+G +YH LVIIADGQVT+ ER+T+ AI +AS PLSI+M+GVG+GPWD REFD+R+P RR+DNF+FV + + AL L E+P+QY+ IQ LG++G G+ PG S AA P ++CP+T E+M DPV+ DG+SY+R I WL+ H TSPM+N L K + PNHALR+SI + E Sbjct: 91 IARTLQSFDDDGLIPAFGFGDATTGDAGVFHFFRGGIPAQGLEALAYRYRELAPHVKLAGPTSFAPAIYQAMRTVCDSGGQYHILVIIADGQVTRPTDTPPNYCSKQERETIDAIVNASELPLSIVMVGVGDGPWDVMREFDDRIPQRRWDNFQFVNFTEIAAAYSSMPQRMETIFALRTLMEIPEQYKIIQKLGLLGRRTARIAGIKVMDPPGPVSGYGAAVQPSVAPPQQANFVNPSPVAAAGPSLLPEPGNTSIQNPGSASMRALFTKGSSMLRESTPEGPPPMFICPITQEIMKDPVMAADGYSYDRSSITQWLQTHHTSPMTNTQLPHKTLTPNHALRSSIMEYLEE 442
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A8B8EAA8_CRAVI (E3 ubiquitin-protein ligase RGLG4-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EAA8_CRAVI) HSP 1 Score: 192 bits (488), Expect = 3.930e-52 Identity = 97/187 (51.87%), Postives = 131/187 (70.05%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHR----RLKYGDAEALALSALAEVPDQYRAIQALGIM 551 Q+V+ + + L P + + I +GFGD T +SVF FM+D PC G+ LD+Y+ IA V SGPT+FAPLI KAIEIV+ T +YH L+IIADGQV +E TV AI +ASNYPLSI+++GVG+GPWDT EFD+ LP R++DN +FV++ ++K+ DA AL AL E+P QYR I+ LG + Sbjct: 130 QKVISVIAQTLEPFDDDNYIPAFGFGDTKTLGDSVFPFMSDGSPCKGFGEVLDKYSDIATRVVFSGPTNFAPLIHKAIEIVKTTKKYHILIIIADGQVNEEERTVEAIVEASNYPLSIVVVGVGDGPWDTMDEFDDCLPNRKFDNCQFVDYHAVTSKVKHPDAN-FALHALMEIPLQYRTIKKLGYL 315
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: A0A7S4D2N9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D2N9_9EUGL) HSP 1 Score: 191 bits (484), Expect = 5.070e-52 Identity = 95/187 (50.80%), Postives = 133/187 (71.12%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHRRLK--YGDAEA-LALSALAEVPDQYRAIQALGIMG 554 Q+V+ +G+ L + + I +GFGD +T+D SVF FM D +PC L L RY I PAV+LSGPTSFAP+I +A++I + E++ L+IIADGQVT E+ T+RAI+ AS YPL IIM+GVG+GPWD + FD++LP R++DNF+FV++ L +G EA AL AL E+P Q+ AI+ LG++G Sbjct: 106 QKVISIIGKTLSAFDEDNLIPVFGFGDATTKDRSVFPFMPDARPCQGLEDVLHRYTQITPAVSLSGPTSFAPIIDEAVKICAEHMEFNILLIIADGQVTNEKATIRAIERASQYPLCIIMVGVGDGPWDMMKAFDDKLPYRQFDNFQFVDYHSLMAMHGQTEARFALMALMEIPQQFNAIKRLGLLG 292
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Match: UPI00148A77D2 (E3 ubiquitin-protein ligase RGLG4-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A77D2) HSP 1 Score: 190 bits (483), Expect = 1.930e-51 Identity = 94/185 (50.81%), Postives = 131/185 (70.81%), Query Frame = 3 Query: 3 QEVLKGVGRGLGPLNRADKIWCYGFGDESTRDESVFCFMADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMIGVGEGPWDTCREFDNRLPGRRYDNFRFVEHR----RLKYGDAEALALSALAEVPDQYRAIQALG 545 Q+V+ + + L P + + I +GFGD T +SVF FM+D PC + LDRY+ IA V SGPT+FAPL+ KAIEIV+ T +YH L+I+ADGQV +E+ TV AI +ASN+PLSI+++GVG+GPWDT EFD+ LP R++DNF+FV++ ++K+ DA AL AL E+P QY+ I+ LG Sbjct: 128 QKVISVIAQTLEPFDDDNYIPAFGFGDTKTLGDSVFPFMSDGSPCKGFAEVLDRYSDIATKVTFSGPTNFAPLVYKAIEIVKTTQKYHILIIVADGQVNEEQQTVEAIVEASNHPLSIVVVGVGDGPWDTMDEFDDCLPNRKFDNFQFVDYHAVTSKVKHPDAN-FALHALMEIPLQYKTIRKLG 311 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9569.18551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9569.18551.1 >prot_L-elsbetiae_contig9569.18551.1 ID=prot_L-elsbetiae_contig9569.18551.1|Name=mRNA_L-elsbetiae_contig9569.18551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp MADDQPCANLGQALDRYASIAPAVALSGPTSFAPLIRKAIEIVQDTGEYHback to top mRNA from alignment at L-elsbetiae_contig9569:2708..6626- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9569.18551.1 ID=mRNA_L-elsbetiae_contig9569.18551.1|Name=mRNA_L-elsbetiae_contig9569.18551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3919bp|location=Sequence derived from alignment at L-elsbetiae_contig9569:2708..6626- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9569:2708..6626- >mRNA_L-elsbetiae_contig9569.18551.1 ID=mRNA_L-elsbetiae_contig9569.18551.1|Name=mRNA_L-elsbetiae_contig9569.18551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1656bp|location=Sequence derived from alignment at L-elsbetiae_contig9569:2708..6626- (Laminarionema elsbetiae ELsaHSoW15)back to top |