prot_L-elsbetiae_contig9561.18547.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9561.18547.1
Unique Nameprot_L-elsbetiae_contig9561.18547.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length132
Homology
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BLAST of mRNA_L-elsbetiae_contig9561.18547.1 vs. uniprot
Match: A0A6H5JST9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST9_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-11
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0 
Query:    4 VGTDLILRAARDLEGGLRGALEHAGDLAGMEALYEKSGAEITIDHDQVRAGAQVFEATVGECNNQDRSFHQKYSDLLTARVHRAARAA 91
            VG   +L A+ +  GGL   L  A  L  +E L +  G +++I+    + GA+V EAT+GECNN D SFHQ  +DL TA++HRA++AA
Sbjct:   66 VGIVKMLAASSETPGGLPAVLREAEGLRDLEVLVKNLGGDLSINLLN-QEGAEVLEATIGECNNGDGSFHQPGADLKTAKIHRASQAA 152
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9561.18547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JST9_9PHAE1.100e-1144.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9561contigL-elsbetiae_contig9561:4828..5223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9561.18547.1mRNA_L-elsbetiae_contig9561.18547.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9561 4828..5225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9561.18547.1 ID=prot_L-elsbetiae_contig9561.18547.1|Name=mRNA_L-elsbetiae_contig9561.18547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp
GRQVGTDLILRAARDLEGGLRGALEHAGDLAGMEALYEKSGAEITIDHDQ
VRAGAQVFEATVGECNNQDRSFHQKYSDLLTARVHRAARAAAPTSSATTP
LYHKNANDGSCEQTIATDGSHNCRPLKDYPEG
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