prot_L-elsbetiae_contig9530.18515.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9530.18515.1
Unique Nameprot_L-elsbetiae_contig9530.18515.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
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BLAST of mRNA_L-elsbetiae_contig9530.18515.1 vs. uniprot
Match: D7FVD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD1_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 2.570e-5
Identity = 53/173 (30.64%), Postives = 67/173 (38.73%), Query Frame = 0 
Query:   25 MSGEASSTGTTLMTSHQPESRVNYAAVQLEWHELFHAVLDADTQREQSTRLRRQWHVAARGYAMVKKDEFIEAPQTTSCSEEFGTDTPTPGHTDDEASDEEGGQTPLASDDEINNATTGDQLTTRQWTRSPRDSTANQDDSMASFGYDAAVVSPIFFGYTSTTDADLDAADAK 197
            M GEAS+T          + +++ A VQLEWHELF AVLDAD +RE STR          G A+                                                                        +Q D+  +FG DAAVVSP+FFGY STT+AD+DA +AK
Sbjct:    1 MPGEASAT-----RGEHADGQIDLAEVQLEWHELFRAVLDADEEREHSTR--------NLGGAI------------------------------------------------------------------------SQHDTEVTFGCDAAVVSPVFFGYMSTTEADVDAENAK 88
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9530.18515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVD1_ECTSI2.570e-530.64Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9530contigL-elsbetiae_contig9530:2327..4991 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9530.18515.1mRNA_L-elsbetiae_contig9530.18515.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9530 2326..4991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9530.18515.1 ID=prot_L-elsbetiae_contig9530.18515.1|Name=mRNA_L-elsbetiae_contig9530.18515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
IEDVEVVLDRFRARIGLDEDPSKDMSGEASSTGTTLMTSHQPESRVNYAA
VQLEWHELFHAVLDADTQREQSTRLRRQWHVAARGYAMVKKDEFIEAPQT
TSCSEEFGTDTPTPGHTDDEASDEEGGQTPLASDDEINNATTGDQLTTRQ
WTRSPRDSTANQDDSMASFGYDAAVVSPIFFGYTSTTDADLDAADAKERA
SLEQEEARIIEKQRAGRDCQLAKEREEASKRREARERTV
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