prot_L-elsbetiae_contig9530.18514.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9530.18514.1
Unique Nameprot_L-elsbetiae_contig9530.18514.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig9530.18514.1 vs. uniprot
Match: D7FVD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.720e-30
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 0 
Query:   14 VTTLEAEFERARKKRMLELQTAKKVMAVEEYDPVLKQWNADEASITQAHESELAERKCKFAFLNREDSKSIQQAANAAKYA 94
            V T+EAEFER R+KR+ ELQTAKKVMA +EY PVLKQWN DEASIT+AHESELAERK KFAFLNREDSK+IQ AANAAKYA
Sbjct:   89 VVTMEAEFERGRQKRITELQTAKKVMAADEYGPVLKQWNIDEASITKAHESELAERKYKFAFLNREDSKNIQHAANAAKYA 169
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BLAST of mRNA_L-elsbetiae_contig9530.18514.1 vs. uniprot
Match: A0A6H5K633_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K633_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.500e-19
Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0 
Query:   39 MAVEEYDPVLKQWNADEASITQAHESELAERKCKFAFLNREDSKSIQQAANAAKYA 94
            MA EEY PVLKQWN DEASIT+AHESELAERK KFAFLNREDSK+IQ AANAAKYA
Sbjct:    1 MAAEEYGPVLKQWNIDEASITKAHESELAERKYKFAFLNREDSKNIQHAANAAKYA 56
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9530.18514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVD1_ECTSI1.720e-3082.72Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K633_9PHAE1.500e-1987.50Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9530contigL-elsbetiae_contig9530:1114..2368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9530.18514.1mRNA_L-elsbetiae_contig9530.18514.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9530 1114..2368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9530.18514.1 ID=prot_L-elsbetiae_contig9530.18514.1|Name=mRNA_L-elsbetiae_contig9530.18514.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
EEASKRREARERTVTTLEAEFERARKKRMLELQTAKKVMAVEEYDPVLKQ
WNADEASITQAHESELAERKCKFAFLNREDSKSIQQAANAAKYA
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