prot_L-elsbetiae_contig940.18397.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig940.18397.1
Unique Nameprot_L-elsbetiae_contig940.18397.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length366
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig940.18397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 211..253
e-value: 2.9E-8
score: 33.7
coord: 80..121
e-value: 3.1E-6
score: 27.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 14..260
e-value: 7.3E-15
score: 56.2
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 140..339
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 13..252
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 140..339
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 13..252
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..65
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 23..258
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig940contigL-elsbetiae_contig940:23051..24148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig940.18397.1mRNA_L-elsbetiae_contig940.18397.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig940 23051..24148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig940.18397.1 ID=prot_L-elsbetiae_contig940.18397.1|Name=mRNA_L-elsbetiae_contig940.18397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=366bp
MSRVKRFAFDDGFNGDVHGVAWPASLEYLIFEGDCNQSVQMVVWPVSLQV
LIFFGGVTSFAGVSWPPSLRSLMLFSSVPNESIAGATWPVSLKLLYLGRG
FNQPIDTVAWPPSLKKLHLGSDFIQPIAGVKWPASLQQLSLDGNFRHLAG
DITWPASLQQLTLGSVFNQPITGATWPPLLQQLTFGYKFNQSIAGVTWPP
SLQQLTFGDRFDQPIAKATWPPSLQRLRFNVKFNQPLADVSWPDSLQEIT
FSGDVEMHSWLHDGKLFVGEREMLSNFNQPITEVRWPASLLKVTFGDFFD
QPIDGVAWPASLRELAFGRDFRLPKKSFEWPASFQQLTIARRPNELLPSW
PGVRVIGIWRAYWNS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf