prot_L-elsbetiae_contig937.18368.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig937.18368.1
Unique Nameprot_L-elsbetiae_contig937.18368.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length763
Homology
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: A0A6H5JE11_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE11_9PHAE)

HSP 1 Score: 525 bits (1351), Expect = 1.590e-172
Identity = 407/825 (49.33%), Postives = 461/825 (55.88%), Query Frame = 0
Query:   17 SSTHPLVPATRGLGLGSLSSRALFARASSGASRLALPSSPSVTPGVGSADTYRGRNVPRGSSLSLSLXXXXXXXXXXXXXXQHPLAGYPLRVPARHAGSGGRADGGRPSVHRLASGGREAWRAPAAAYNAAERRTGRDNTALRAVSARLDAAATAIDAVEIGVRSASDSLDSLLQLLESR--PASAVTPGATTSNRXXXXXXXXXXXXXXXXXXXEASFSMAGAVPGDLSGDISA-SPRSAV------------------------------------------ASREAAPLISARGAEAGGGLRAANMLRRELIVSLPPPADHSQTEEQVNADEQNRGTVSHSISHRADSSAAEDPAATRDALVGEAKEEPTRPARLGERSNPVCASPHLAPSPRRQEIVEEPTSSTT-------------IQGQATRGHH-----GIGTVARSAPTTRAS----GEDGGD--HGPPRSSQSSESTRPSPRAVRAAGSNTSLSATEV---ETETNRDSSLPLLELEVAMSGIDAERGRLVLEIARLRGQQNQSLVQLQRLQHEQFIVRQRQVSTLSDIVNSFGRTVEAAGALPHGEDSSLGRISNDVVSTLRRMLRLLSATVPSDATAPGARSTSPTL---ASLPPSTXXXXXXXXXXXXXXRSGSAASSTGTYSVGGRIALRPTGGDLTQEVIDAALQALPRLAAAATAISGARRVQGYLAGL-GGGTPDAPDER-----RSCSKETIAALPDAPPYATGVVGGASDSGGVRGCVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQVPNVKIGSPAPTSTP 760
            SST P+VP  RGL L SL  R L ARAS+  S L  P      PG G ADT R R+ P                        HP A YPLRVP RH    GR+DGGR S+ RLA GGR+AWR    AY+A  R TGRD TALRAVSARLDAA+TAIDAVEIGVRSASDSLDSLLQLLESR  PA + T  ++TS                     E   + A +     +G +S  SPRS+V                                          A+R+ AP++ AR  E GGG RAA MLRRE    L   ++    E             S ++  R D  A E   AT D  + E  EE +   R G+      A P    SP  QE+VEE  SS               + G AT G H     GIG    +APT  A+    G D     +  PRS + + S R SPR +   GS  + S  E    ET    + +LP+ EL    +GID ERGRL+LEIARLRGQQNQSLV L RLQHEQF+VRQRQVSTLSDIVNSFGRTV AA ALPHGEDSSLGRIS+DVVSTLRRMLRLLSATVP+   A  A   SP L   +S+   T                  A+ S GTYSVGGR+ALRP G DLTQEVIDAALQALPRLAAAATAISGA R+QGYLA L GGGT D          R CSKETIAALPDA     G VG   D G VRGCVICLSE+ T  + LCRLPC+HVFHR CVGKWLSMQDSCPTCR QVPNV+IGS   T+ P
Sbjct:    2 SSTRPVVPTARGLELQSLIPRTLSARAST--SSLFTP-----LPGAGLADTPRSRSPPSSXXXXXXXQQDRQ---------NHPTA-YPLRVPNRH----GRSDGGRASIRRLAGGGRDAWRTAPVAYSAVVRGTGRDTTALRAVSARLDAASTAIDAVEIGVRSASDSLDSLLQLLESRHGPAVSQTSLSSTSAEVDAFENGSADPGPSSRGIGEGGRAAASSDSQASAGAMSMRSPRSSVSPPAVSLPTSSGLMVGASSSESPRDEFNVSTPPPQPMGPPRYANRDGAPIV-ARVPEGGGGSRAAIMLRREQQAGLTAFSNPEAGEHLCR---------SPAVLPRQDGGAQEGSVATGDTSIDETNEEHSTRTRSGQHLTSALALPRPVSSPAVQELVEEVNSSRRTAERETSESHGVGMAGSATAGQHLPADIGIGGTMEAAPTDLAALRMLGSDRTTSLNSVPRSVREAGSRRASPRGMEGTGSGAASSTRETYAGETSGRGNVALPVREL----NGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAAALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQLAPGNSPVLTTTSSVSDGTPPPAPNTPRPTAVREGQVASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGGTSDTVGRGSDYTGRCCSKETIAALPDASQPVEGAVGEV-DGGDVRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTLATTAP 790          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: D7FQ33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ33_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 2.730e-139
Identity = 298/541 (55.08%), Postives = 331/541 (61.18%), Query Frame = 0
Query:  256 ASREAAPLISARGAEAGGGLRAANMLRRELIVSLPPPADHSQTEEQVNADEQNRGTVSHSISHRADSSAAEDPAATRDALVGEAKEEPTRPARLGERSNPVCASPHLAPSPRRQEIVEEPTSSTT-------------IQGQATRGHH-----GIGTVARSAPTTRASGED-GGDHGP-----PRSSQSSESTRPSPRAVRAAGSNTSLSATEV---ETETNRDSSLPLLELEVAMSGIDAERGRLVLEIARLRGQQNQSLVQLQRLQHEQFIVRQRQVSTLSDIVNSFGRTVEAAGALPHGEDSSLGRISNDVVSTLRRMLRLLSATVPSDATAPGARSTSPTLA--SLPPSTXXXXXXXXXXXXXXRSGSAAS-STGTYSVGGRIALRPTGGDLTQEVIDAALQALPRLAAAATAISGARRVQGYLAGLGGGTPDAPDERRS------CSKETIAALPDAPPYATGVVGGASDSGGVRGCVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQVPNVKIGSPAPTSTP 760
            A+R+ AP++ AR  E GGG RAA+MLRRE    L   ++    E         R T    +  R D  A E   AT DA + E  EE +   R G+      A P    SP  QE+VEE  SS               + G AT G H      IG    +APT  A+    G D  P     PR  + + S R SPR +   GS  + S  E    ET    D +LP+ ELE AM+GID ERGRL+LEIARLRGQQNQSLV L RLQHEQF+VRQRQVSTLSDIVNSFGRTV AAGALPHGEDSSLGRIS+DVVSTLRRMLRLLSATVP+   A  A   SP L   S  P                R G AAS S GTYSVGGR+ALRP G DLTQEVIDAALQALPRLAAAATAISGA R+QGYLA L GG       RRS      CSKETIAALPDA     G VG   D GGVRGCVICLSE+ T  + LCRLPC+HVFHR CVGKWLSMQDSCPTCR QVPNV+IGS   T+ P
Sbjct:   29 ANRDGAPIV-ARVPEGGGGSRAASMLRREQQAGLTTFSNPEAGEHLC------RSTA---VLPRQDGGAQESSVATGDASIDETNEEHSTRTRSGQHLTSALALPRPVSSPAAQELVEEVNSSRRTAERETSESHGVGMAGSATAGQHLPADIDIGGTMEAAPTDLAALRTLGSDRTPSLDSGPRLVREAGSRRASPRGMEGTGSGAASSTREANAGETSGRGDMALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQSAPGNSPVLTTTSSVPDGAPPPAPNAPRPAAVREGQAASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGEASDTAGRRSDYTGRCCSKETIAALPDASQPVEGAVGEV-DGGGVRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTLATTAP 558          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: UPI001EEB320E (E3 ubiquitin-protein ligase MPSR1-like isoform X2 n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEB320E)

HSP 1 Score: 57.8 bits (138), Expect = 3.830e-7
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  701 CVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQV 746
            CVIC  E+  TE    RLPC+H FH  C+GKWL +Q +CPTCR  V
Sbjct:   15 CVICF-EEFITEYGCKRLPCNHKFHSQCIGKWLLVQKTCPTCRKNV 59          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: I1H503_BRADI (RING-type domain-containing protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1H503_BRADI)

HSP 1 Score: 59.3 bits (142), Expect = 7.390e-7
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0
Query:  701 CVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQVP 747
            C ICL+ D   ++    LPC H FHR CVGKWL +  +CPTCR Q+P
Sbjct:   59 CAICLAADDQRKKA--ELPCGHRFHRGCVGKWLRVHGTCPTCRHQLP 103          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: A0A0E0N2L1_ORYRU (RING-type domain-containing protein n=8 Tax=Oryza TaxID=4527 RepID=A0A0E0N2L1_ORYRU)

HSP 1 Score: 60.8 bits (146), Expect = 1.480e-6
Identity = 34/84 (40.48%), Postives = 42/84 (50.00%), Query Frame = 0
Query:  663 APDERRSCSKETIAALPDAPPYATGVVGGASDSGGVRGCVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQV 746
            AP ++       IAALP A   A G V G   +GG   C ICL      + +     C HVFH AC+ KWL+   SCP CR+ V
Sbjct:   82 APPKQVGLDPSAIAALPTA---AYGKVAGGDAAGGTTECAICLGAMQEADAVRVLPACRHVFHVACIDKWLASSSSCPVCRAGV 162          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: UPI001EECD42C (E3 ubiquitin protein ligase RIE1-like isoform X1 n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EECD42C)

HSP 1 Score: 57.8 bits (138), Expect = 1.660e-6
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  701 CVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQV 746
            CVIC  E+  TE    RLPC+H FH  C+GKWL +Q +CPTCR  V
Sbjct:   71 CVICF-EEFITEYGCKRLPCNHKFHSQCIGKWLLVQKTCPTCRKNV 115          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: A0A833VGC1_9POAL (E3 ubiquitin-protein ligase RING1-like protein n=2 Tax=Carex littledalei TaxID=544730 RepID=A0A833VGC1_9POAL)

HSP 1 Score: 60.5 bits (145), Expect = 2.490e-6
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  701 CVICLSEDSTTEEL-LCRLPCDHVFHRACVGKWLSMQDSCPTCRSQVP 747
            CVIC+ E  T +E  + +LPCDH+FH+ C+G WLS  ++CP CR ++P
Sbjct:  201 CVICMDEMCTQDEAEITKLPCDHLFHKNCIGLWLSSNNTCPLCRFKLP 248          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: W4FD02_9STRA (RING-type domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FD02_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.540e-6
Identity = 22/45 (48.89%), Postives = 34/45 (75.56%), Query Frame = 0
Query:  701 CVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQ 745
            CV+C++ +++ E L+  LPC H+FH AC+G WL ++ +CPTCR Q
Sbjct:   78 CVVCMNPNNSDESLV--LPCGHIFHEACIGSWLRLRSTCPTCRYQ 120          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: A0A169WTZ9_DAUCS (RING-type E3 ubiquitin transferase n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A169WTZ9_DAUCS)

HSP 1 Score: 57.8 bits (138), Expect = 6.710e-6
Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 0
Query:  701 CVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQVP---NVKIGSPAPTSTPVV 762
            C +CL E    EELL    C H+FHR C+G WLS  ++CP CRS V    N ++  P    +P V
Sbjct:  104 CCVCLGEFEMKEELLQVPSCQHIFHRDCIGNWLSSSNTCPLCRSVVEIVDNTRLVLPPSQRSPAV 168          
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Match: A0A8B8LA52_ABRPR (E3 ubiquitin-protein ligase RHA1B-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8LA52_ABRPR)

HSP 1 Score: 57.4 bits (137), Expect = 7.130e-6
Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  683 PYAT-GVVGGASDSGGVRGCVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSM-QDSCPTCRSQ-VPNVKI 751
            P AT GVV G S +     C +CLSE    EE+ C   C H+FHRACV +W+   Q +CP CR+  VP+ K+
Sbjct:   75 PVATYGVVAGDSPA---AACAVCLSEFWAEEEIRCMANCKHIFHRACVDRWIDHDQKTCPLCRTPFVPHHKV 143          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig937.18368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE11_9PHAE1.590e-17249.33RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FQ33_ECTSI2.730e-13955.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001EEB320E3.830e-756.52E3 ubiquitin-protein ligase MPSR1-like isoform X2 ... [more]
I1H503_BRADI7.390e-753.19RING-type domain-containing protein n=2 Tax=Brachy... [more]
A0A0E0N2L1_ORYRU1.480e-640.48RING-type domain-containing protein n=8 Tax=Oryza ... [more]
UPI001EECD42C1.660e-656.52E3 ubiquitin protein ligase RIE1-like isoform X1 n... [more]
A0A833VGC1_9POAL2.490e-650.00E3 ubiquitin-protein ligase RING1-like protein n=2... [more]
W4FD02_9STRA2.540e-648.89RING-type domain-containing protein n=6 Tax=Aphano... [more]
A0A169WTZ9_DAUCS6.710e-643.08RING-type E3 ubiquitin transferase n=1 Tax=Daucus ... [more]
A0A8B8LA52_ABRPR7.130e-645.83E3 ubiquitin-protein ligase RHA1B-like n=1 Tax=Abr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 701..742
e-value: 8.9E-7
score: 38.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 701..743
e-value: 2.0E-10
score: 40.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 701..743
score: 12.445
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 691..754
e-value: 1.5E-15
score: 58.1
NoneNo IPR availablePANTHERPTHR15710:SF30LD47007Pcoord: 584..748
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 584..748
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..762
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 28..39
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 700..749

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig937contigL-elsbetiae_contig937:4868..7156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig937.18368.1mRNA_L-elsbetiae_contig937.18368.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig937 4685..7457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig937.18368.1 ID=prot_L-elsbetiae_contig937.18368.1|Name=mRNA_L-elsbetiae_contig937.18368.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=763bp
MSRSISSRSRRAASMSSSTHPLVPATRGLGLGSLSSRALFARASSGASRL
ALPSSPSVTPGVGSADTYRGRNVPRGSSLSLSLQQQQQQQHDHHQQQQHP
LAGYPLRVPARHAGSGGRADGGRPSVHRLASGGREAWRAPAAAYNAAERR
TGRDNTALRAVSARLDAAATAIDAVEIGVRSASDSLDSLLQLLESRPASA
VTPGATTSNRGSSGGSSSGGGGGASSPPEEASFSMAGAVPGDLSGDISAS
PRSAVASREAAPLISARGAEAGGGLRAANMLRRELIVSLPPPADHSQTEE
QVNADEQNRGTVSHSISHRADSSAAEDPAATRDALVGEAKEEPTRPARLG
ERSNPVCASPHLAPSPRRQEIVEEPTSSTTIQGQATRGHHGIGTVARSAP
TTRASGEDGGDHGPPRSSQSSESTRPSPRAVRAAGSNTSLSATEVETETN
RDSSLPLLELEVAMSGIDAERGRLVLEIARLRGQQNQSLVQLQRLQHEQF
IVRQRQVSTLSDIVNSFGRTVEAAGALPHGEDSSLGRISNDVVSTLRRML
RLLSATVPSDATAPGARSTSPTLASLPPSTTETTAAAATADDTSRSGSAA
SSTGTYSVGGRIALRPTGGDLTQEVIDAALQALPRLAAAATAISGARRVQ
GYLAGLGGGTPDAPDERRSCSKETIAALPDAPPYATGVVGGASDSGGVRG
CVICLSEDSTTEELLCRLPCDHVFHRACVGKWLSMQDSCPTCRSQVPNVK
IGSPAPTSTPVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD