prot_L-elsbetiae_contig9366.18362.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9366.18362.1
Unique Nameprot_L-elsbetiae_contig9366.18362.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
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BLAST of mRNA_L-elsbetiae_contig9366.18362.1 vs. uniprot
Match: A0A6H5KNG5_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG5_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.320e-7
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:   22 AAGSSSGDASGPVREVFCRVLPQPPVLPAADTIMVALKTAKLHDGDGSVGTLPEALGLMYGGVHVVY 88
            AAG  SG  SG + EVFCR LP   +   +  +  A  TA   D +G V  L EALGL+YGGVHVV+
Sbjct:   92 AAGGPSGQGSGQIIEVFCRSLPLLRMSATSPALRTATATADRSDANGVVDALREALGLIYGGVHVVH 158
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BLAST of mRNA_L-elsbetiae_contig9366.18362.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.600e-6
Identity = 38/81 (46.91%), Postives = 45/81 (55.56%), Query Frame = 0 
Query:    9 RGSEVDRAGSSLSAAGSS-SGDASGPVREVFCRVLPQPPVLPAADTIMVALKTAKLHDGDGSVGTLPEALGLMYGGVHVVY 88
            R S  +  G S+SAA S  S   SG + EVFCR LP      A+  +  A  TA   D  G V  L EALGL+YGGVHVV+
Sbjct:   77 RRSSENPCGRSVSAAASGPSEQGSGHITEVFCRSLPLLRTPAASPALRTATATADRSDAHGVVDALREALGLIYGGVHVVH 157
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9366.18362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNG5_9PHAE1.320e-749.25BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LHG8_ECTSI1.600e-646.91BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9366contigL-elsbetiae_contig9366:5296..5559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9366.18362.1mRNA_L-elsbetiae_contig9366.18362.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9366 5296..5561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9366.18362.1 ID=prot_L-elsbetiae_contig9366.18362.1|Name=mRNA_L-elsbetiae_contig9366.18362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
EDLQRRGIRGSEVDRAGSSLSAAGSSSGDASGPVREVFCRVLPQPPVLPA
ADTIMVALKTAKLHDGDGSVGTLPEALGLMYGGVHVVY
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