prot_L-elsbetiae_contig918.18202.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig918.18202.1
Unique Nameprot_L-elsbetiae_contig918.18202.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
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BLAST of mRNA_L-elsbetiae_contig918.18202.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 8.580e-27
Identity = 57/78 (73.08%), Postives = 63/78 (80.77%), Query Frame = 0 
Query:    2 DRKGKGEKEPPVEVLDLPAVLSPGATPLDARLAVVHALMSASEGGQGGGIGGGFRFWEHLCLLSALQAVCEEWTGLKK 79
            DRKG  +K   +EVL+LP VL+PGATPLDARLAVVH LM   E G GGGIG GFRF EHLCLLSALQAVCEEW GL++
Sbjct: 1358 DRKGMDKKGKALEVLELPGVLAPGATPLDARLAVVHGLM---EKGGGGGIGAGFRFGEHLCLLSALQAVCEEWLGLRR 1432
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig918.18202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE8.580e-2773.08HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig918contigL-elsbetiae_contig918:3821..4562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig918.18202.1mRNA_L-elsbetiae_contig918.18202.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig918 3821..4562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig918.18202.1 ID=prot_L-elsbetiae_contig918.18202.1|Name=mRNA_L-elsbetiae_contig918.18202.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
LDRKGKGEKEPPVEVLDLPAVLSPGATPLDARLAVVHALMSASEGGQGGG
IGGGFRFWEHLCLLSALQAVCEEWTGLKKKR*
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