prot_L-elsbetiae_contig9174.18195.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9174.18195.1
Unique Nameprot_L-elsbetiae_contig9174.18195.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length217
Homology
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BLAST of mRNA_L-elsbetiae_contig9174.18195.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.230e-14
Identity = 76/167 (45.51%), Postives = 82/167 (49.10%), Query Frame = 0 
Query:    4 RAAAPHVVTGRRVIRRVSSSPR----ATAPRPRVSTSPRDIVAPSGIGAAHQTSVSV-TSPLDVERVAAPAAAPWRVSNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQKRRLEQSEGSCFVPCARRRSS-EGRTGRSV-------EVGGEGHAQQARFRG 157
            +A A H+V GRRV+RRVSSSPR    A A  P VSTSP DI AP  +G A      V TSPLDVERVA P  AP     A                                 GQKRRL QS GSCFVPCARRR S EG+  R V        VGGE   + A  RG
Sbjct:  406 KAVASHMVAGRRVVRRVSSSPRCGGAAVARPPLVSTSPWDIAAPPPLGRAGPEPRRVYTSPLDVERVA-PRRAPIVAVQACPDLPDALRRQSVGVGGGG--------------GQKRRLHQSSGSCFVPCARRRRSVEGKDVRRVGVADAGGHVGGERVEEDAAGRG 557
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9174.18195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9F0_9PHAE1.230e-1445.51Cyclin N-terminal domain-containing protein n=2 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9174contigL-elsbetiae_contig9174:4186..4836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9174.18195.1mRNA_L-elsbetiae_contig9174.18195.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9174 4145..5097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9174.18195.1 ID=prot_L-elsbetiae_contig9174.18195.1|Name=mRNA_L-elsbetiae_contig9174.18195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MPPRAAAPHVVTGRRVIRRVSSSPRATAPRPRVSTSPRDIVAPSGIGAAH
QTSVSVTSPLDVERVAAPAAAPWRVSNASSSSSSSSQQYFELAEASRRQS
GGGGGGGGGGRGQKRRLEQSEGSCFVPCARRRSSEGRTGRSVEVGGEGHA
QQARFRGMGAAVREQGVGFAHHQAPATNAQQWDGRGPGRTSASRQQLLPS
LTGYSAGRTVNRSASR*
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