prot_L-elsbetiae_contig9163.18188.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9163.18188.1
Unique Nameprot_L-elsbetiae_contig9163.18188.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length235
Homology
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.030e-49
Identity = 129/165 (78.18%), Postives = 142/165 (86.06%), Query Frame = 0
Query:    8 APGSNANASVPRGKRGKLKKMKKKYAEQDEHDRRLAMEALGKAPSHPEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNLKKSEAELTATLASLDPAVRERLSALVKPDDLDPFEVRALGQFNTADALDILDRFAEADLRKVRNRSGFLAGIMRKHGSAST 172
            AP    +A+VPRGKR KLK+MKKKYAEQD+ DR+LAMEALGK P      XXXXXXXXXXX     XXXXXXXXXXXXXXSKNL+K+EAEL AT+A+LD  VR RLS LVKPD+LDPFEVRALG+F+TADALDILDRFAEADLR+VRNRSGFLAGIMRKHGSAST
Sbjct:  907 APKKRMSANVPRGKRSKLKRMKKKYAEQDDDDRKLAMEALGKGPXXXXXXXXXXXXXXXXXRPGDRXXXXXXXXXXXXXXSKNLRKTEAELAATVAALDADVRGRLSELVKPDELDPFEVRALGKFDTADALDILDRFAEADLRRVRNRSGFLAGIMRKHGSAST 1071          
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.320e-11
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  116 LVKPDDLDPFEVRALGQFNTADALDILDRFAEADLRKVRNRSGFLAGIMRKHGS 169
            L+K  +LD FE+RAL +F   DAL IL+RFAEADLRKV N+SGFLAGIMRK+GS
Sbjct: 1109 LLKATELDAFELRALSRFEPDDALRILERFAEADLRKVGNKSGFLAGIMRKYGS 1162          
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.460e-10
Identity = 54/164 (32.93%), Postives = 78/164 (47.56%), Query Frame = 0
Query:    8 APGSNANASVPRGKRGKLKKMKKKYAEQDEHDRRLAMEALGKAPSHPEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNLKKSEAELTATLASLDPAVRERLSALV-----KPDDLDPFEVRALGQFNTADALDILDRFAEADLRKVRNRSGFLAGIMRK 166
            AP      ++PRGKRGKL+K+K++YA+QDE D  L   A+G      E                                ++ L+  + +    L+ + P VRE L ALV     K ++LD FE+ AL        L ++  F E+DLRK  N+SG LAGI+R+
Sbjct:  881 APSETGAGTLPRGKRGKLRKVKRRYADQDEEDLALHRLAVGHDKLVDE------ESGSGAGENTLDDAQGAARTVASQDIARYLRGDKGD---ALSGMLPQVREALEALVRQRLVKLEELDTFELTALAALELEQGLQVVAAFGESDLRKAGNKSGMLAGILRR 1035          
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: A0A7S1ITM1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ITM1_9EUGL)

HSP 1 Score: 56.6 bits (135), Expect = 9.280e-6
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query:  105 LDPAVRERLS-----ALVKPDDLDPFEVRALGQFNTADALDILDRFAEADLRKVRNRSGFLAGIMRK 166
            L P V+ERL+      L+ P DLDP  + ++ QF     L IL++ + ADL  +RN++GFLAGIM++
Sbjct:  248 LPPVVQERLNLFYSMGLMNPSDLDPAILESMAQFPAETGLAILEKLSTADLANIRNKNGFLAGIMKR 314          
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: A0A2R5G0G8_9STRA (Nuclear export mediator factor Nemf n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0G8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.670e-5
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    9 PGSNANASVPRGKRGKLKKMKKKYAEQDEHDRRLAMEALG 48
            P  NAN  +PR KRGKLKKMKKKY +Q E DRRLAM ALG
Sbjct:  925 PAKNANTELPRRKRGKLKKMKKKYGDQTEEDRRLAMIALG 964          
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: A0A7S0LZI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZI5_9CRYP)

HSP 1 Score: 55.5 bits (132), Expect = 2.170e-5
Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  105 LDPAVRERLSALV-----KPDDLDPFEVRALGQFNTADALDILDRFAEADLRKVRNRSGFLAGIMRK 166
            + P+VRERL AL      + D++D   +++L +F+ A AL IL  F EAD+  +RN+S FLAG+M++
Sbjct:   93 MKPSVRERLEALFASGKCRRDEIDFKIMQSLSEFSEASALQILINFGEADMSSIRNKSAFLAGVMKR 159          
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Match: A0A1Y5I896_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I896_OSTTA)

HSP 1 Score: 53.9 bits (128), Expect = 9.230e-5
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    6 DLAPGSNANASVPRGKRGKLKKMKKKYAEQDEHDRRLAMEALG 48
            D A GS+AN   PRGK  KLKK+K KYA+QDE DR LAM+ LG
Sbjct:  551 DRADGSSANKPAPRGKAAKLKKIKAKYADQDEEDRELAMKLLG 593          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9163.18188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LHP2_ECTSI1.030e-4978.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCK8_9STRA1.320e-1170.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1AHC6_9STRA1.460e-1032.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1ITM1_9EUGL9.280e-643.28Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A2R5G0G8_9STRA1.670e-572.50Nuclear export mediator factor Nemf n=1 Tax=Hondae... [more]
A0A7S0LZI5_9CRYP2.170e-543.28Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A1Y5I896_OSTTA9.230e-565.12Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 105..166
e-value: 1.2E-12
score: 47.6
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 9..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9163contigL-elsbetiae_contig9163:1011..3653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9163.18188.1mRNA_L-elsbetiae_contig9163.18188.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9163 1009..3653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9163.18188.1 ID=prot_L-elsbetiae_contig9163.18188.1|Name=mRNA_L-elsbetiae_contig9163.18188.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
KRGGLDLAPGSNANASVPRGKRGKLKKMKKKYAEQDEHDRRLAMEALGKA
PSHPEGGAAAAAGGRRRFREGDRKEAAAAEAAAAAAASKNLKKSEAELTA
TLASLDPAVRERLSALVKPDDLDPFEVRALGQFNTADALDILDRFAEADL
RKVRNRSGFLAGIMRKHGSASTTNSGGSTAAASTAAAAKLATGEGEDAST
ATGLSPVPPPPPPPPLPADAAEKEQEGVVGVGVGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041337hnRNP_Q_AcD