prot_L-elsbetiae_contig9157.18183.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9157.18183.1
Unique Nameprot_L-elsbetiae_contig9157.18183.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length277
Homology
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Match: D8LKL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL5_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 7.030e-101
Identity = 159/277 (57.40%), Postives = 195/277 (70.40%), Query Frame = 0
Query:    1 LYSLNFVQHKTYYWAVEAENDIDEYIESANPSSNAEDWVPEFRVVFVSRRYTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAVLLVGLFFFNNPFFAAQIYSSSPKPSFIWYALVQGMFVSLLLLFWADRTLEDGMGNNESRRNGATARGAGVVLALLLCVVYIVNMIDIRISRDGSPDRVHKYPYTSTATERMLTILCLIYCFWIIVLAGRAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAIILEHLQPRVRG 277
            LYS+NFV+HKTYYWA+E +N +DE+I  A+P +  +DW+ EF            +L W+Y+W  +TLLVMFLP  GFFT+A+   +R SKW+RLQKWAAVLLVGLFFFNNPF AAQIY +SPK +FIWYA+ +G+FVSLLLLF  DR  E G  +NE    GA ARGAGV+LALLLC+VY++NMIDIR+SRDG+PDRVHKYPYTST TE++LT+L  +YC W + LAGRAW                               LPAIILE+LQPRVRG
Sbjct:  182 LYSVNFVEHKTYYWAIETDNGMDEFIADADPDA-FQDWLSEF------------ELAWYYTWAFVTLLVMFLPPRGFFTVALRDDIRWSKWTRLQKWAAVLLVGLFFFNNPFLAAQIYGASPKSTFIWYAVAEGVFVSLLLLFLLDRLFEAGNADNERGTKGAPARGAGVMLALLLCIVYVINMIDIRVSRDGNPDRVHKYPYTSTGTEKILTVLVFVYCCWALPLAGRAWRWGRGREKLRSSPRARFVVLSSFVTLALL--LPAIILEYLQPRVRG 443          
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Match: A0A812S7F5_SYMMI (TMEM181 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7F5_SYMMI)

HSP 1 Score: 91.7 bits (226), Expect = 5.530e-18
Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 0
Query:   47 VSRRYTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAVLLVGLFFFNNPFFAAQIYSSSPKPSFIWYALVQGMFVSLLLLFWAD-----RTLEDG-MGNNES-RRNGATARGAGVVLALLLCVVYIVNMIDIRISRDGSPDRVHKYPYTSTATERMLTILCLIYCFWIIVL 226
            ++  Y+ F+LGW   ++L TL+VMFLP  GF    +A   R+  WS  Q W   LLVGL FFN+PFFAAQ+Y+       I Y      F+ ++LLFW       RT + G +G+ ++ RR         + L  L+  + +     +R+ R G P       +     E +L +L  IYC ++  L
Sbjct:   82 INSEYSKFELGWKCFFILTTLVVMFLPEEGFLIRLLAVPYRL--WSFEQTWVLTLLVGLIFFNDPFFAAQLYTHKSDSMAILYIFFTTAFLGIVLLFWLCVLDEMRTTDSGGVGSMDTGRRRPFAFYTPKLTLVTLIWTLLMTTYAYVRLERLGDPTYEGLDDWVLLDIEIVLAVLLFIYCLYLFAL 266          
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Match: A0A835YX26_9STRA (Wnt-binding factor required for Wnt secretion-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX26_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.430e-13
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 0
Query:   41 EFRVVFVSRRYTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAVLLVGLFFFNNPFFAAQIYSSS-PKPSFI-WYALVQGMFVSLLLLFW----ADRTL---EDGMGNNESRRNGATARGAGVVLALLLCVVYIVNM---IDIRISRDGSP--DRVHKYPYTSTATERMLTILCLIYCFWIIV 225
            E +V +V+  YT F++GW Y ++++T +   LPR G++        R S WS  QKW   LL+GLF+FN+PFFAA++YS    +  F  +Y L    F+S+LLL+W    +D  L    +G G  +        R      A+L+  + +VN       R ++  SP  D V      +     +L  L  +Y  W+ V
Sbjct:  193 ETQVWYVNDAYTKFEMGWKYFFVVVTFVAALLPRWGYYMKLRT--TRRSTWSFQQKWTLTLLIGLFWFNDPFFAARVYSEGGTQLGFTAFYMLCVLAFMSMLLLWWLCVFSDMVLIGAREGAGGGQGSALQLHGRCYWAPKAILVAGITLVNAGAYFYYRYTKTVSPEYDGVSDAKTQAKVFAGLLGTLMAVYLVWLAV 389          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKL5_ECTSI7.030e-10157.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812S7F5_SYMMI5.530e-1833.16TMEM181 protein (Fragment) n=1 Tax=Symbiodinium mi... [more]
A0A835YX26_9STRA3.430e-1331.66Wnt-binding factor required for Wnt secretion-doma... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06664MIG-14_Wnt-bdcoord: 1..270
e-value: 1.7E-40
score: 139.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..268
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 269..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 229..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 190..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..77
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 125..144
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
IPR040416Transmembrane protein 181PANTHERPTHR31918FAMILY NOT NAMEDcoord: 41..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9157contigL-elsbetiae_contig9157:2263..7810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9157.18183.1mRNA_L-elsbetiae_contig9157.18183.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9157 2263..7810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9157.18183.1 ID=prot_L-elsbetiae_contig9157.18183.1|Name=mRNA_L-elsbetiae_contig9157.18183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
LYSLNFVQHKTYYWAVEAENDIDEYIESANPSSNAEDWVPEFRVVFVSRR
YTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAV
LLVGLFFFNNPFFAAQIYSSSPKPSFIWYALVQGMFVSLLLLFWADRTLE
DGMGNNESRRNGATARGAGVVLALLLCVVYIVNMIDIRISRDGSPDRVHK
YPYTSTATERMLTILCLIYCFWIIVLAGRAWWGGGGTVSEKLRSSRRVQF
FVVASLMTMLLLLPAIILEHLQPRVRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040416TMEM181