mRNA_L-elsbetiae_contig9157.18183.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Match: D8LKL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL5_ECTSI) HSP 1 Score: 314 bits (805), Expect = 7.030e-101 Identity = 159/277 (57.40%), Postives = 195/277 (70.40%), Query Frame = 1 Query: 1 LYSLNFVQHKTYYWAVEAENDIDEYIESANPSSNAEDWVPEFRVVFVSRRYTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAVLLVGLFFFNNPFFAAQIYSSSPKPSFIWYALVQGMFVSLLLLFWADRTLEDGMGNNESRRNGATARGAGVVLALLLCVVYIVNMIDIRISRDGSPDRVHKYPYTSTATERMLTILCLIYCFWIIVLAGRAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAIILEHLQPRVRG 831 LYS+NFV+HKTYYWA+E +N +DE+I A+P + +DW+ EF +L W+Y+W +TLLVMFLP GFFT+A+ +R SKW+RLQKWAAVLLVGLFFFNNPF AAQIY +SPK +FIWYA+ +G+FVSLLLLF DR E G +NE GA ARGAGV+LALLLC+VY++NMIDIR+SRDG+PDRVHKYPYTST TE++LT+L +YC W + LAGRAW LPAIILE+LQPRVRG Sbjct: 182 LYSVNFVEHKTYYWAIETDNGMDEFIADADPDA-FQDWLSEF------------ELAWYYTWAFVTLLVMFLPPRGFFTVALRDDIRWSKWTRLQKWAAVLLVGLFFFNNPFLAAQIYGASPKSTFIWYAVAEGVFVSLLLLFLLDRLFEAGNADNERGTKGAPARGAGVMLALLLCIVYVINMIDIRVSRDGNPDRVHKYPYTSTGTEKILTVLVFVYCCWALPLAGRAWRWGRGREKLRSSPRARFVVLSSFVTLALL--LPAIILEYLQPRVRG 443
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Match: A0A812S7F5_SYMMI (TMEM181 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7F5_SYMMI) HSP 1 Score: 91.7 bits (226), Expect = 5.530e-18 Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 139 VSRRYTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAVLLVGLFFFNNPFFAAQIYSSSPKPSFIWYALVQGMFVSLLLLFWAD-----RTLEDG-MGNNES-RRNGATARGAGVVLALLLCVVYIVNMIDIRISRDGSPDRVHKYPYTSTATERMLTILCLIYCFWIIVL 678 ++ Y+ F+LGW ++L TL+VMFLP GF +A R+ WS Q W LLVGL FFN+PFFAAQ+Y+ I Y F+ ++LLFW RT + G +G+ ++ RR + L L+ + + +R+ R G P + E +L +L IYC ++ L Sbjct: 82 INSEYSKFELGWKCFFILTTLVVMFLPEEGFLIRLLAVPYRL--WSFEQTWVLTLLVGLIFFNDPFFAAQLYTHKSDSMAILYIFFTTAFLGIVLLFWLCVLDEMRTTDSGGVGSMDTGRRRPFAFYTPKLTLVTLIWTLLMTTYAYVRLERLGDPTYEGLDDWVLLDIEIVLAVLLFIYCLYLFAL 266
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Match: A0A835YX26_9STRA (Wnt-binding factor required for Wnt secretion-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX26_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.430e-13 Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 1 Query: 121 EFRVVFVSRRYTGFQLGWFYSWLLITLLVMFLPRHGFFTLAIAGGVRVSKWSRLQKWAAVLLVGLFFFNNPFFAAQIYSSS-PKPSFI-WYALVQGMFVSLLLLFW----ADRTL---EDGMGNNESRRNGATARGAGVVLALLLCVVYIVNM---IDIRISRDGSP--DRVHKYPYTSTATERMLTILCLIYCFWIIV 675 E +V +V+ YT F++GW Y ++++T + LPR G++ R S WS QKW LL+GLF+FN+PFFAA++YS + F +Y L F+S+LLL+W +D L +G G + R A+L+ + +VN R ++ SP D V + +L L +Y W+ V Sbjct: 193 ETQVWYVNDAYTKFEMGWKYFFVVVTFVAALLPRWGYYMKLRT--TRRSTWSFQQKWTLTLLIGLFWFNDPFFAARVYSEGGTQLGFTAFYMLCVLAFMSMLLLWWLCVFSDMVLIGAREGAGGGQGSALQLHGRCYWAPKAILVAGITLVNAGAYFYYRYTKTVSPEYDGVSDAKTQAKVFAGLLGTLMAVYLVWLAV 389 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9157.18183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9157.18183.1 >prot_L-elsbetiae_contig9157.18183.1 ID=prot_L-elsbetiae_contig9157.18183.1|Name=mRNA_L-elsbetiae_contig9157.18183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp LYSLNFVQHKTYYWAVEAENDIDEYIESANPSSNAEDWVPEFRVVFVSRRback to top mRNA from alignment at L-elsbetiae_contig9157:2263..7810+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9157.18183.1 ID=mRNA_L-elsbetiae_contig9157.18183.1|Name=mRNA_L-elsbetiae_contig9157.18183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5548bp|location=Sequence derived from alignment at L-elsbetiae_contig9157:2263..7810+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9157:2263..7810+ >mRNA_L-elsbetiae_contig9157.18183.1 ID=mRNA_L-elsbetiae_contig9157.18183.1|Name=mRNA_L-elsbetiae_contig9157.18183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1662bp|location=Sequence derived from alignment at L-elsbetiae_contig9157:2263..7810+ (Laminarionema elsbetiae ELsaHSoW15)back to top |