prot_L-elsbetiae_contig9.18001.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9.18001.1
Unique Nameprot_L-elsbetiae_contig9.18001.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length537
Homology
BLAST of mRNA_L-elsbetiae_contig9.18001.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 6.760e-186
Identity = 326/561 (58.11%), Postives = 383/561 (68.27%), Query Frame = 0
Query:    1 MKVSKDMRLSWLQHWHSMDDDGSNLLDYTEFVQGCGLHDNMWSWRMFSMLDKHFVGVAFRMCSRRGATWDPDQSVLDEKDIRLFVEERSKRLPQLWSARRDKKWTT----WARCTSLYSGCLQLSVGSAAKQATKSLADSARGVSHGGSMILQMSARKMDKTRDLLKSESQRLTGAARDAAKGMEKVGRLKTTAMVSVAIRRMRALAKAAKQASLASALPRHLPDAET----GKRVSEAARAGGGRALAALKRSVRVITAARHFREAGR--GNGPQRLQEENKAGATNSAKGDDETED-----LRGEYRDSEDLESTGEHQTEEQEGEEAPEKLWHTLTGAKAKAKVKLLQDLHWAATEIFYANLAAATERLEVARTQEKGHDFSADFPKLWCEAHMHGSQGERKTEHRRNRRSSATKRVANVYLRFGT-----GDDSGRSKLAKAFQRWRLNTCDAAVDGLSGSSLTLRRGETTAGEIGFTIGELAHIPRHNLSLKEMWETS-----GGENRLHDIVMNKARADRPRPWELCETYEREMVERINRRQAENNIPILPFPIC 536
            M VS DMRLSWLQ W SMD+DGSNLLDY EF+Q C L DNMWSWRMF++LDK+FV VAFRMCSRRG+TWDPD+SVLDEKDIRLFVEER   L  L++       T+    WAR  S+    L   V  A+K+ TK LA+SAR +S  G  I ++SARKM  TRD LK ES+ LT AA+ AA+ +EK GRLK T  V+VA+ RMRALA+AA+Q           PD ET    GKRV EAA+ GG +AL+AL+RS   ITAAR+F EAG     G  R  ++ +  + N   GD    D     L GE  DSED +   E   E +    A EK W  LT AKAKA+VK+ Q+ HWA TE FYANL  A+ERLE  RT+EKG+DFSADFPKLWC A+M GSQGER+ ++RR RRSSA+K+ ANVYLRF T     GDDSGRSKLAKAF RWRLNTCDAAVD LSGS  TL RG T A E   T     + PRH  SLKEMWE++     G    +H I+M KA+ADRP P ELCE YEREMVERI+RRQAENN+PI+P PIC
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERI--LHHLYNEGLKDGPTSARARWAR--SMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQR----------PDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRARED-FESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEESST-----YAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 541          
BLAST of mRNA_L-elsbetiae_contig9.18001.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 7.650e-129
Identity = 300/713 (42.08%), Postives = 353/713 (49.51%), Query Frame = 0
Query:    1 MKVSKDMRLSWLQHWHSMDDDGSNLLDYTEFVQGCGLHDNMWSWRMFSMLDKHFVGVAFRMCSRRG----------------------ATWDPDQSVLD---------EKDIRLFVEERS--KRLPQLWSAR------------RDKKWTT-----------------------------------------------------WARCTSLYSGCLQLSVGSAAKQATKSLADSARGVSHGGSMILQMSARKMDKTRDLLKSESQRLTGAARDAAKGMEKVGRLKTTAMVSVAIRRMRALAKAAKQASLASALPRHLPDAET----GKRVSEAARAGGGRALAALKRSVRVITAARHFREAGR--GNGPQRLQEENKAGATNSAKGDDETED-----LRGEYRDSEDLESTGEHQTEEQEGEEAPEKLWHTLTGAKAKAKVKLLQDLHWAATEIFYANLAAATERLEVARTQEKG------------------------------HDFSADFPKLWCEAHMHGSQGERKTEHRRNRRSSATKRVANVYLRFG---------------------------------TGDDSGRSKLAKAFQRWRLNTCDAAVDGLSGSSLTLRRGETTAGEIGFTIGELAHIPRHNLSLKEMWETS-----GGENRLHDIVMNKARADRPRPWELCETYEREMVERINRRQAENNIPILPFPIC 536
            MKVS DMRLSWLQ W SMD+DGSNLLDYTEF+Q CGL DN+WSWRMF++LDK+FVGV       RG                      A       VL+          K IR    E S  + L    + R            R K WTT                                                     WAR  S+    L  SV +A+K+ATK LA+SAR +S  G  I Q+SARKM  TR  LK ES+ LT AA+ AA+ +EK GRLK  A V+VA                        PD ET    GKRV EAA+ GG +ALAAL+RS   ITA R+F EA +    G  R Q++ +  + N   GD +  D     L G   DSED +   E    E     A EKLW  LT AKAKA+VK+ Q+ HWAATE FY NL  ATERLE  +T+EKG                              +DFSADFPKLWC A M  SQGERK ++RR RRSSA+K+ ANV++  G                                  GDDSGRSKLAKAF RWRLNTCDAAVD LSGS  TL +G   A E   T     + PRH  SL EMWE++     G    LH I+M K +ADRP P ELCE YEREMVERI+RRQAENN+PI+P PIC
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAYLGARGFVTAVNRRVAAAAQRQFQTMALAAASKKMQVLNGMSSIGNTTAKKIRRVASESSIGRHLNSGGNERPTVAKPGDVVMKRLKLWTTATSAVDSERPLTTRVERVRATLRRVVSDSDLGNIGKSERSAKFGESLTGARARWAR--SMSPAELSSSVKTASKRATKHLAESARDISQSGGAIRQLSARKMADTRGWLKVESEMLTEAAKGAARDLEKFGRLKAIATVAVA-----------------------RPDDETARKTGKRVGEAAKVGGEKALAALRRSFVAITAVRYFSEAVKDAARGGLRRQDQQRPTSANLG-GDPDVADSGYGMLLGGDEDSEDSQRAREDDESEVPAT-AEEKLWDILTDAKAKAEVKVFQERHWAATEKFYENLVTATERLEEKKTKEKGKYSILNGIVGKKQFLNVTPCLPLRSGYEKRYDFSADFPKLWCVATMRDSQGERKIQYRRKRRSSASKKAANVFMCLGLDVNRQRKREQSTVWQVLASIQNNKLVLQQHQEAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSKGGRAASEESST-----NAPRHIPSLMEMWESAAAAGEGEGTHLHAIIMKKVQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 681          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9.18001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLD7_ECTSI6.760e-18658.11EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JXQ3_9PHAE7.650e-12942.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9contigL-elsbetiae_contig9:18045..23734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9.18001.1mRNA_L-elsbetiae_contig9.18001.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9 18045..23734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9.18001.1 ID=prot_L-elsbetiae_contig9.18001.1|Name=mRNA_L-elsbetiae_contig9.18001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=537bp
MKVSKDMRLSWLQHWHSMDDDGSNLLDYTEFVQGCGLHDNMWSWRMFSML
DKHFVGVAFRMCSRRGATWDPDQSVLDEKDIRLFVEERSKRLPQLWSARR
DKKWTTWARCTSLYSGCLQLSVGSAAKQATKSLADSARGVSHGGSMILQM
SARKMDKTRDLLKSESQRLTGAARDAAKGMEKVGRLKTTAMVSVAIRRMR
ALAKAAKQASLASALPRHLPDAETGKRVSEAARAGGGRALAALKRSVRVI
TAARHFREAGRGNGPQRLQEENKAGATNSAKGDDETEDLRGEYRDSEDLE
STGEHQTEEQEGEEAPEKLWHTLTGAKAKAKVKLLQDLHWAATEIFYANL
AAATERLEVARTQEKGHDFSADFPKLWCEAHMHGSQGERKTEHRRNRRSS
ATKRVANVYLRFGTGDDSGRSKLAKAFQRWRLNTCDAAVDGLSGSSLTLR
RGETTAGEIGFTIGELAHIPRHNLSLKEMWETSGGENRLHDIVMNKARAD
RPRPWELCETYEREMVERINRRQAENNIPILPFPIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS