prot_L-elsbetiae_contig8992.17992.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8992.17992.1
Unique Nameprot_L-elsbetiae_contig8992.17992.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length620
Homology
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5JRU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU1_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 2.410e-63
Identity = 168/434 (38.71%), Postives = 233/434 (53.69%), Query Frame = 0
Query:   26 RTERPMYHLWKLRNLRNEAGRLSSSTAKGLVYGPILSEHTLRAISQRKHKELVTALVARADYRENLSLPPEWLSTPIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETLFNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSSTGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQEAFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVA---NVAAVTDRTLKSMKAD--EXXXXXXAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA 450
            RTE P++  W L +LR EA R  +     L +GP+L E  LR IS    +EL+ AL  R  +R  L + PE      G TP K K+  ++      ++  Q     +QA    CR +CL +     + Y  F+GG  GE  GT R+E D    G KH FF  +ARAMA   WR   GN ++VP+DHS+D+ AS+ LK+ L+ L LE    +LQ ELR +F G + AFY DLQ RC NWLK ++ +HT +   E+ SGG GAD  QDG    A H F FM+G + T+LW+D + L  GGDD      + ++ DG+PG+GSS+PGG GVR R   +PA  + +    K KKPKT +  +D A++  D    +A     A   +R  K    D  +      A E   D V++   K D A +   +E Y +LL+ A
Sbjct:  307 RTEPPLFDCWPLPSLRQEATR-EAGRRNALKFGPLL-EQELRQISNASKQELIDALTGRMKWRARLGVKPELKGIRCGVTPEKKKQLRRS------RQTGQPTPNSSQA--LCCRLVCLTLHPEFKDDYMCFRGG--GE--GTARTELDVRATGAKHRFFARVARAMATPTWRDGNGNPLSVPNDHSKDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDEGAFYADLQLRCFNWLKEVRGKHTKFKENEQRSGGAGADATQDGGFVNARHPFQFMRGSLPTMLWEDGIELSGGGDDETYRPGDIVLPDGHPGSGSSVPGGPGVRGRGEATPARSSGNTNSRKHKKPKTGS--DDRAELVADTKEVIALWRKAAEQEERGDKPAFGDIEKDRAKDLAMEGFIDDVQRLQAKVDSASSDFLREKYQKLLDAA 724          
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5JXW8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW8_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 6.220e-55
Identity = 144/373 (38.61%), Postives = 203/373 (54.42%), Query Frame = 0
Query:   87 YRENLSLPPEWLSTPIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETLFNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSSTGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQEAFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVA---NVAAVTDRTLKSMKAD--EXXXXXXAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA 450
            +R +L + PEW     G TP K K+  ++      +++ Q     +QA    CR +CL +     + Y  F+GG  GE  GT R+E D    G KH FF  +ARAMA   WR   GN ++VP+DHS+D+ AS+ LK+ L+ L LE    +LQ ELR +F G + AFY DLQ RC NWLK ++ +HT +   E+ SGG GAD  QDG    A H F FM+G + T+LW+D + L  GGDD      + ++ DG+PG+GSS+PGG GVR R   +PA  + +    K KKPKT +  +D A++  D    +A     A   +R  K    D  +      A E   D V++   K D A +   +E Y +LL+ A
Sbjct:    3 WRASLGVEPEWKGIRCGVTPEKKKQLRRS------RQSGQPTPNSSQA--LCCRLVCLTLHPEFKDDYMCFRGG--GE--GTARTELDVRATGAKHRFFARVARAMATPTWRDGNGNPLSVPNDHSKDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDEGAFYADLQLRCFNWLKEVRGKHTKFKENEQRSGGAGADATQDGGFVNARHPFQFMRGSLPTMLWEDGIELSGGGDDETYRPGDIVLPDGHPGSGSSVPGGPGVRGRGEATPARSSGNTNSRKHKKPKTGS--DDRAELVADTKEVIALWRKAAEQEERGDKPAIGDIEKDRAKDLAMEGFIDDVQRLQAKVDSASSDFLREKYQKLLDAA 361          
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5KYJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ0_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 3.570e-51
Identity = 123/291 (42.27%), Postives = 167/291 (57.39%), Query Frame = 0
Query:   87 YRENLSLPPEWLSTPIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETLFNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSSTGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQEAFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKT 373
            +R +L + PEW     G TP K K+  ++      ++  Q     +QA    CR +CL +     + Y  FKGG  GE  GT R+E D    G KH FF  +ARAMA    R   GN ++VPD+HS D+ AS+ LK+ L+ L LE    +LQ ELR +F G   AFY DLQ RC NWLK ++ +HT +   E+ SGG GAD  QDG    A + F FM+G +  +LW+D + L  GGDD     ++ ++ DG+PG+GSS+PGG GVR R   +PA+ A +    K KKPKT
Sbjct:    3 WRASLGVEPEWKGIRYGVTPEKKKKLRRS------RQPGQPTPNSSQA--LCCRLVCLTLHPEFKDDYMCFKGG--GE--GTARTELDVRATGAKHGFFARVARAMATPTCRDGNGNPLSVPDEHSNDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDDGAFYADLQLRCFNWLKEVRGKHTKFGENEQRSGGAGADATQDGGFVNAHNPFQFMRGALPAMLWEDGIDLSGGGDDETYRPSDIVLPDGHPGSGSSVPGGPGVRGRGEATPASSAGNTNSRKHKKPKT 281          
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5JDY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.890e-13
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 0
Query:  274 YAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVANVAAVTDRTLKSMK-----ADEXXXXXXAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA 450
            +   E+ SGG GAD  QDG    A H F FM+G + T+LW+D + L  GGDD      + ++ DG+PG+GSS+PGG GVR R   +PA  + +    K KKPKT +  +D A++  D    VA      ++ ++  +      ++      A E   D V++   K D   +   +E Y +LL+ A
Sbjct:   96 FKENEQRSGGAGADATQDGGFVNARHPFQFMRGSLPTMLWEDGIELSGGGDDESYRPGDIVLPDGHPGSGSSVPGGPGVRGRGEATPARSSGNTNSRKHKKPKTGS--DDRAELVADTKEVVALWRKAAEQEVRGDEPAFGDTEKDRAKDLAMEGFIDDVQRLQAKVDPGSSNFLREKYQKLLDAA 279          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JRU1_9PHAE2.410e-6338.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXW8_9PHAE6.220e-5538.61Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYJ0_9PHAE3.570e-5142.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDY9_9PHAE2.890e-1333.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 407..430
NoneNo IPR availableCOILSCoilCoilcoord: 447..467
NoneNo IPR availableCOILSCoilCoilcoord: 507..541

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8992contigL-elsbetiae_contig8992:116..2442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8992.17992.1mRNA_L-elsbetiae_contig8992.17992.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8992 116..2442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8992.17992.1 ID=prot_L-elsbetiae_contig8992.17992.1|Name=mRNA_L-elsbetiae_contig8992.17992.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=620bp
MGATSAPAPAPVPQGQGGEADLSVTRTERPMYHLWKLRNLRNEAGRLSSS
TAKGLVYGPILSEHTLRAISQRKHKELVTALVARADYRENLSLPPEWLST
PIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETL
FNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSS
TGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQE
AFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQ
FDFMKGKIATLLWDDLMRLLAGGDDGGMAETIISDGNPGAGSSIPGGAGV
RSRTSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVANVAAVTDR
TLKSMKADEEEEEEEAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA
TSSLRQLKADRQAKKEAAAAAAAAKAAADEAADAVARAAAAEALLAAEQA
AADGVARKKAQEEFEAEEARLAAAEKERVAVEKKKEEERAAAAAVAEKER
VAAVAAARAARASAAGRLAYASMPATTVPGGAQGMLSLPGRAGGGQSTHG
QSTTAAAAAFAEFNARGGPT
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