mRNA_L-elsbetiae_contig8992.17992.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5JRU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU1_9PHAE) HSP 1 Score: 233 bits (593), Expect = 2.410e-63 Identity = 168/434 (38.71%), Postives = 233/434 (53.69%), Query Frame = 1 Query: 76 RTERPMYHLWKLRNLRNEAGRLSSSTAKGLVYGPILSEHTLRAISQRKHKELVTALVARADYRENLSLPPEWLSTPIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETLFNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSSTGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQEAFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVA---NVAAVTDRTLKSMKAD--EXXXXXXAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA 1350 RTE P++ W L +LR EA R + L +GP+L E LR IS +EL+ AL R +R L + PE G TP K K+ ++ ++ Q +QA CR +CL + + Y F+GG GE GT R+E D G KH FF +ARAMA WR GN ++VP+DHS+D+ AS+ LK+ L+ L LE +LQ ELR +F G + AFY DLQ RC NWLK ++ +HT + E+ SGG GAD QDG A H F FM+G + T+LW+D + L GGDD + ++ DG+PG+GSS+PGG GVR R +PA + + K KKPKT + +D A++ D +A A +R K D + A E D V++ K D A + +E Y +LL+ A Sbjct: 307 RTEPPLFDCWPLPSLRQEATR-EAGRRNALKFGPLL-EQELRQISNASKQELIDALTGRMKWRARLGVKPELKGIRCGVTPEKKKQLRRS------RQTGQPTPNSSQA--LCCRLVCLTLHPEFKDDYMCFRGG--GE--GTARTELDVRATGAKHRFFARVARAMATPTWRDGNGNPLSVPNDHSKDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDEGAFYADLQLRCFNWLKEVRGKHTKFKENEQRSGGAGADATQDGGFVNARHPFQFMRGSLPTMLWEDGIELSGGGDDETYRPGDIVLPDGHPGSGSSVPGGPGVRGRGEATPARSSGNTNSRKHKKPKTGS--DDRAELVADTKEVIALWRKAAEQEERGDKPAFGDIEKDRAKDLAMEGFIDDVQRLQAKVDSASSDFLREKYQKLLDAA 724
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5JXW8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW8_9PHAE) HSP 1 Score: 201 bits (512), Expect = 6.220e-55 Identity = 144/373 (38.61%), Postives = 203/373 (54.42%), Query Frame = 1 Query: 259 YRENLSLPPEWLSTPIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETLFNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSSTGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQEAFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVA---NVAAVTDRTLKSMKAD--EXXXXXXAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA 1350 +R +L + PEW G TP K K+ ++ +++ Q +QA CR +CL + + Y F+GG GE GT R+E D G KH FF +ARAMA WR GN ++VP+DHS+D+ AS+ LK+ L+ L LE +LQ ELR +F G + AFY DLQ RC NWLK ++ +HT + E+ SGG GAD QDG A H F FM+G + T+LW+D + L GGDD + ++ DG+PG+GSS+PGG GVR R +PA + + K KKPKT + +D A++ D +A A +R K D + A E D V++ K D A + +E Y +LL+ A Sbjct: 3 WRASLGVEPEWKGIRCGVTPEKKKQLRRS------RQSGQPTPNSSQA--LCCRLVCLTLHPEFKDDYMCFRGG--GE--GTARTELDVRATGAKHRFFARVARAMATPTWRDGNGNPLSVPNDHSKDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDEGAFYADLQLRCFNWLKEVRGKHTKFKENEQRSGGAGADATQDGGFVNARHPFQFMRGSLPTMLWEDGIELSGGGDDETYRPGDIVLPDGHPGSGSSVPGGPGVRGRGEATPARSSGNTNSRKHKKPKTGS--DDRAELVADTKEVIALWRKAAEQEERGDKPAIGDIEKDRAKDLAMEGFIDDVQRLQAKVDSASSDFLREKYQKLLDAA 361
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5KYJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ0_9PHAE) HSP 1 Score: 190 bits (482), Expect = 3.570e-51 Identity = 123/291 (42.27%), Postives = 167/291 (57.39%), Query Frame = 1 Query: 259 YRENLSLPPEWLSTPIGQTPTKAKEKEQALVAAAVKKASQAKAGVTQAQQYTCRFICLMVDETLFNLYQRFKGGQGGEEVGTLRSEHDGGQLGHKHAFFVAIARAMANENWRSSTGNRIAVPDDHSQDDRASDALKAQLECLQLEETPAALQLELRERFHGKQEAFYLDLQQRCANWLKAIKAEHTSYAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKT 1119 +R +L + PEW G TP K K+ ++ ++ Q +QA CR +CL + + Y FKGG GE GT R+E D G KH FF +ARAMA R GN ++VPD+HS D+ AS+ LK+ L+ L LE +LQ ELR +F G AFY DLQ RC NWLK ++ +HT + E+ SGG GAD QDG A + F FM+G + +LW+D + L GGDD ++ ++ DG+PG+GSS+PGG GVR R +PA+ A + K KKPKT Sbjct: 3 WRASLGVEPEWKGIRYGVTPEKKKKLRRS------RQPGQPTPNSSQA--LCCRLVCLTLHPEFKDDYMCFKGG--GE--GTARTELDVRATGAKHGFFARVARAMATPTCRDGNGNPLSVPDEHSNDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDDGAFYADLQLRCFNWLKEVRGKHTKFGENEQRSGGAGADATQDGGFVNAHNPFQFMRGALPAMLWEDGIDLSGGGDDETYRPSDIVLPDGHPGSGSSVPGGPGVRGRGEATPASSAGNTNSRKHKKPKT 281
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Match: A0A6H5JDY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY9_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 2.890e-13 Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 820 YAAREKLSGGGGADGFQDGADEGASHQFDFMKGKIATLLWDDLMRLLAGGDDGGM--AETIISDGNPGAGSSIPGGAGVRSR--TSPATGAISAQVPKRKKPKTEATAEDTAKIKKDLAVAVANVAAVTDRTLKSMK-----ADEXXXXXXAYERAADKVEKFTVKRDGAVTADAKETYIELLEGA 1350 + E+ SGG GAD QDG A H F FM+G + T+LW+D + L GGDD + ++ DG+PG+GSS+PGG GVR R +PA + + K KKPKT + +D A++ D VA ++ ++ + ++ A E D V++ K D + +E Y +LL+ A Sbjct: 96 FKENEQRSGGAGADATQDGGFVNARHPFQFMRGSLPTMLWEDGIELSGGGDDESYRPGDIVLPDGHPGSGSSVPGGPGVRGRGEATPARSSGNTNSRKHKKPKTGS--DDRAELVADTKEVVALWRKAAEQEVRGDEPAFGDTEKDRAKDLAMEGFIDDVQRLQAKVDPGSSNFLREKYQKLLDAA 279 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8992.17992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8992.17992.1 >prot_L-elsbetiae_contig8992.17992.1 ID=prot_L-elsbetiae_contig8992.17992.1|Name=mRNA_L-elsbetiae_contig8992.17992.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=620bp MGATSAPAPAPVPQGQGGEADLSVTRTERPMYHLWKLRNLRNEAGRLSSSback to top mRNA from alignment at L-elsbetiae_contig8992:116..2442+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8992.17992.1 ID=mRNA_L-elsbetiae_contig8992.17992.1|Name=mRNA_L-elsbetiae_contig8992.17992.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2327bp|location=Sequence derived from alignment at L-elsbetiae_contig8992:116..2442+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8992:116..2442+ >mRNA_L-elsbetiae_contig8992.17992.1 ID=mRNA_L-elsbetiae_contig8992.17992.1|Name=mRNA_L-elsbetiae_contig8992.17992.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3720bp|location=Sequence derived from alignment at L-elsbetiae_contig8992:116..2442+ (Laminarionema elsbetiae ELsaHSoW15)back to top |