prot_L-elsbetiae_contig895.17956.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig895.17956.1
Unique Nameprot_L-elsbetiae_contig895.17956.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length214
Homology
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BLAST of mRNA_L-elsbetiae_contig895.17956.1 vs. uniprot
Match: A0A6H5J913_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J913_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.100e-5
Identity = 25/59 (42.37%), Postives = 34/59 (57.63%), Query Frame = 0 
Query:    7 KSCTHHGCTKSSVYGKAGGKAEYCRDHAKAGMVDVKKKICASPGCTTTASFGGEDTGTR 65
            +SC    CT    YG    KAE+C+ HAK GM++V  + C+ PGC  +ASFG   +  R
Sbjct:  226 RSCQEPECTTWPSYGARLKKAEFCKRHAKQGMINVVTRKCSHPGCIKSASFGKHGSSKR 284
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig895.17956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J913_9PHAE3.100e-542.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig895contigL-elsbetiae_contig895:22563..25017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig895.17956.1mRNA_L-elsbetiae_contig895.17956.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig895 22462..25162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig895.17956.1 ID=prot_L-elsbetiae_contig895.17956.1|Name=mRNA_L-elsbetiae_contig895.17956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp
MIDVTHKSCTHHGCTKSSVYGKAGGKAEYCRDHAKAGMVDVKKKICASPG
CTTTASFGGEDTGTRKFCAPHAEEGTVNFSRRFRGDSRSGGTNSTGARGS
GTASRAGSGGRQIGLAPSPALASEHSPRRSGTETNKRARQSAGGGDLHPV
RVKREGADNRMPDDEESTASPKPDTAAVKTEDMELPCKVEPAEAAGRASV
ARTKQKKIAGGQA*
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