|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 888 |
| Cds size | 642 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816969.9920776-UTR-L-elsbetiae_contig895:22461..22562 | 1622816969.9920776-UTR-L-elsbetiae_contig895:22461..22562 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig895 22462..22562 + |
| 1691683950.1476974-UTR-L-elsbetiae_contig895:22461..22562 | 1691683950.1476974-UTR-L-elsbetiae_contig895:22461..22562 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig895 22462..22562 + |
| 1622816970.0286493-UTR-L-elsbetiae_contig895:25017..25162 | 1622816970.0286493-UTR-L-elsbetiae_contig895:25017..25162 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig895 25018..25162 + |
| 1691683950.1893675-UTR-L-elsbetiae_contig895:25017..25162 | 1691683950.1893675-UTR-L-elsbetiae_contig895:25017..25162 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig895 25018..25162 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816970.0043979-CDS-L-elsbetiae_contig895:22562..23148 | 1622816970.0043979-CDS-L-elsbetiae_contig895:22562..23148 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig895 22563..23148 + |
| 1691683950.1630917-CDS-L-elsbetiae_contig895:22562..23148 | 1691683950.1630917-CDS-L-elsbetiae_contig895:22562..23148 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig895 22563..23148 + |
| 1622816970.0159733-CDS-L-elsbetiae_contig895:24961..25017 | 1622816970.0159733-CDS-L-elsbetiae_contig895:24961..25017 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig895 24962..25017 + |
| 1691683950.179367-CDS-L-elsbetiae_contig895:24961..25017 | 1691683950.179367-CDS-L-elsbetiae_contig895:24961..25017 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig895 24962..25017 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig895.17956.1 >prot_L-elsbetiae_contig895.17956.1 ID=prot_L-elsbetiae_contig895.17956.1|Name=mRNA_L-elsbetiae_contig895.17956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp
MIDVTHKSCTHHGCTKSSVYGKAGGKAEYCRDHAKAGMVDVKKKICASPG
CTTTASFGGEDTGTRKFCAPHAEEGTVNFSRRFRGDSRSGGTNSTGARGS
GTASRAGSGGRQIGLAPSPALASEHSPRRSGTETNKRARQSAGGGDLHPV
RVKREGADNRMPDDEESTASPKPDTAAVKTEDMELPCKVEPAEAAGRASV
ARTKQKKIAGGQA* back to topmRNA from alignment at L-elsbetiae_contig895:22462..25162+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig895.17956.1 ID=mRNA_L-elsbetiae_contig895.17956.1|Name=mRNA_L-elsbetiae_contig895.17956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2701bp|location=Sequence derived from alignment at L-elsbetiae_contig895:22462..25162+ (Laminarionema elsbetiae ELsaHSoW15)
TGAAGAGCAAGAGATGCACCCACCACGGTTGCACCAAGCAGCCGTCATAC
GGCAAGGCTGGCGGCAAGAGAGAGTACTGCCGTGGCCATGCCAAGGACGG
GATGATAGACGTGACGCACAAGAGCTGCACCCACCACGGTTGCACCAAGT
CGTCGGTATACGGCAAGGCTGGTGGCAAGGCAGAGTACTGCCGTGACCAT
GCCAAGGCGGGGATGGTGGACGTCAAGAAAAAGATATGTGCCTCGCCTGG
GTGCACCACAACTGCCAGCTTCGGCGGGGAAGACACTGGCACCCGGAAGT
TCTGCGCACCACATGCCGAAGAAGGTACGGTTAATTTTTCTCGCCGGTTC
AGGGGGGACAGCAGAAGTGGTGGAACTAACAGCACGGGAGCAAGGGGTAG
TGGCACCGCTAGCCGTGCTGGTTCTGGTGGAAGGCAAATCGGCCTCGCTC
CTTCGCCCGCCCTAGCGTCAGAACATTCCCCGAGAAGGAGCGGCACGGAG
ACCAACAAACGAGCCCGCCAGAGTGCTGGCGGTGGGGACTTACATCCGGT
TAGGGTGAAAAGAGAGGGGGCTGACAACAGGATGCCTGACGACGAGGAAT
CAACGGCATCTCCGAAGCCAGATACTGCTGCGGTGAAGACGGAGGACATG
GAGTTGCCTTGTAAGGTGGAGCCGGCGGAAGCTGCAGGTGCGTTGAAACC
GAGTTCCAGGTAGTGGATGTCTAGGAGTGGTGTGCTACTTTCGGGTTAAT
ATAGAAGGGAGAAGATCATTCGTCAGTATAATAGGCGTGGTCTAGTGAGA
ACAGGGTTTGCAGATACAGTATCGCCGCACAGTATCAGCAGCTTCACCAG
CTTGGTAGCTTTGCTCATCTCGATCTGCCGCTCGCTATGCTTCATGGGCG
CCGAAGACCCCCGCGCTGCAATATCGTACGGTACAACGGAAGCGTGTTAT
CCTCGGTTGGTGTTTAGTGTTCGGCCGCTTCATGTTCCGTTTGTTGGTCA
GTTTTCCCTCGTGTAAAGTTAGCTGACGTGCTTGAATGTACTCTCTGTGT
TCTTGCCCGCCGTTAGGGCATTTTTCGCTTGTTTAACTCATCTGCTGCGG
AGAGAGAATGTTGCTGGATCGGGCACTAGTTTGTGCAGCACAAGAGAGAT
GTGAGGGGCCACGTTTTGTCAAATCACCCTTTCACATGACCAGCATCAGG
CTACACCTCGGGTTTGCTTGTTGTATGGTCCGTCCTGGACAATTTGTTCA
TTTTACGTCTCTTGCCGTAACTTTCGAAAACAAACGAGCAAGACCGATTT
TCAGGTATGAAAGTGATCCCACAGCGAGGAGAAAAAGACACATTAAAAAA
CATATTGGACACCCCCACATTAAATTAAGTGATTGTGTGGCCGAAAAAAT
TGGAGGCAGGGAAAGAATCTGGGTTTTGGACCAATATTGTACGGAATACA
AGATCACCCTTCGGAGCGAGCTCATGAGAGCACAGGGGACGGGGGTGATG
CAAGACGAAAGAAAAAATAATAACCCAGATCTTTGAACCAAAGATTCTGA
ACTCGAACGCCTCTTTTCCCGCAAAAAGCAGGTCCCGTCCTTATATAGAT
CGGACGTAACATCTGCCCTCCTAAGCACAGCAACAGCACCAACCGGGTGC
TTCTTTGTGGGCGCTCCGCCCTTGATCAACACGCTCCGCCTTTGTCAACA
CAGCTGTGCAGGTCTGTGCCCCTCAGCCGTATGTTACAGCTGCTGCTCTG
ACGTGTTTTCCTCCAACTGCAAGAGCAGCTGCTGTCATCCTGACAATCGT
TTGGGCCATTGAGTACCGACAGCCTACTGATGACATATCGGAACAGTAGT
TTTCCCGTTCAAATCTATCATTGTATTTATCTCAACAACCATCATTTTTA
TCAATGATCGGGAAAAAAATGTACCTGGGCATTTTCGAGATAAATCGATT
GCCGTGGTCTATTTAAAAATTAAATGGCTGGTTATCACAGGAAAAAGCGA
ACAAGATGGCCTCTAAAGTCGGGTTTTTAACTGATAGCTTCTTTAATTTT
TACTGAAACCAAAATCGGACAAAATGTGTACTCAGGAAATTCCAAGAGCT
GTCCAAATCCGGTCTCAGAAATTTGTTCTGAGAAAATGCATCCCAGGAAA
AAACGAACAAAAAATATGATATTTTGGAAATAAAAGACGAACAAAAACTA
AAATACAAATCCCACAGGGACGTACCTGCCTGCGCCTGAAGATAAGGCGT
TTGCCGGTATTTTCGGTTTTCGGAACAACCACCTGTGTGCAGAGAAAAGG
GGGCACCTAAGTGCAGGTCGAGATTGTGAAGAATTGGCCGCGGACTGACC
ATACGTTTCGTCACATCTCTCTTCCGCATGAACAGCACCAGGCTAACCCC
CGGTCTTGATTGTTGTACATATGTCCATTCCGGTCTCATATATTTACCGA
TCATCCGAACGTGGCTCTGGTGCACCTGAACCCTTCTCTAACCAATGCAG
GCCGTGCAAGCGTGGCGAGGACGAAGCAGAAGAAGATCGCGGGGGGGCAG
GCGTGAGGGTCTTGACATCGCACCAACAGCAGCAGCAGCAGCACCGTGGT
ATACGGGCCACATCGTGGCGGGAAAGTGTGGACACGAGCGCCTGCGAACG
GCGAAAGCACTACCGGCGTGTTGGTAAAAATGGGCCTTTTTGGTTGAGCG
G back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig895:22462..25162+ >mRNA_L-elsbetiae_contig895.17956.1 ID=mRNA_L-elsbetiae_contig895.17956.1|Name=mRNA_L-elsbetiae_contig895.17956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig895:22462..25162+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATAGACGTGACGCACAAGAGCTGCACCCACCACGGTTGCACCAAGTC
GTCGGTATACGGCAAGGCTGGTGGCAAGGCAGAGTACTGCCGTGACCATG
CCAAGGCGGGGATGGTGGACGTCAAGAAAAAGATATGTGCCTCGCCTGGG
TGCACCACAACTGCCAGCTTCGGCGGGGAAGACACTGGCACCCGGAAGTT
CTGCGCACCACATGCCGAAGAAGGTACGGTTAATTTTTCTCGCCGGTTCA
GGGGGGACAGCAGAAGTGGTGGAACTAACAGCACGGGAGCAAGGGGTAGT
GGCACCGCTAGCCGTGCTGGTTCTGGTGGAAGGCAAATCGGCCTCGCTCC
TTCGCCCGCCCTAGCGTCAGAACATTCCCCGAGAAGGAGCGGCACGGAGA
CCAACAAACGAGCCCGCCAGAGTGCTGGCGGTGGGGACTTACATCCGGTT
AGGGTGAAAAGAGAGGGGGCTGACAACAGGATGCCTGACGACGAGGAATC
AACGGCATCTCCGAAGCCAGATACTGCTGCGGTGAAGACGGAGGACATGG
AGTTGCCTTGTAAGGTGGAGCCGGCGGAAGCTGCAGATGATAGACGTGAC
GCACAAGAGCTGCACCCACCACGGTTGCACCAAGTCGTCGGTATACGGCA
AGGCTGGTGGCAAGGCAGAGTACTGCCGTGACCATGCCAAGGCGGGGATG
GTGGACGTCAAGAAAAAGATATGTGCCTCGCCTGGGTGCACCACAACTGC
CAGCTTCGGCGGGGAAGACACTGGCACCCGGAAGTTCTGCGCACCACATG
CCGAAGAAGGTACGGTTAATTTTTCTCGCCGGTTCAGGGGGGACAGCAGA
AGTGGTGGAACTAACAGCACGGGAGCAAGGGGTAGTGGCACCGCTAGCCG
TGCTGGTTCTGGTGGAAGGCAAATCGGCCTCGCTCCTTCGCCCGCCCTAG
CGTCAGAACATTCCCCGAGAAGGAGCGGCACGGAGACCAACAAACGAGCC
CGCCAGAGTGCTGGCGGTGGGGACTTACATCCGGTTAGGGTGAAAAGAGA
GGGGGCTGACAACAGGATGCCTGACGACGAGGAATCAACGGCATCTCCGA
AGCCAGATACTGCTGCGGTGAAGACGGAGGACATGGAGTTGCCTTGTAAG
GTGGAGCCGGCGGAAGCTGCAGGCCGTGCAAGCGTGGCGAGGACGAAGCA
GAAGAAGATCGCGGGGGGGCAGGCGTGAGCCGTGCAAGCGTGGCGAGGAC
GAAGCAGAAGAAGATCGCGGGGGGGCAGGCGTGA back to top
|