prot_L-elsbetiae_contig894.17954.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig894.17954.1
Unique Nameprot_L-elsbetiae_contig894.17954.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length120
Homology
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: D8LDU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU5_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 2.010e-54
Identity = 81/119 (68.07%), Postives = 100/119 (84.03%), Query Frame = 0
Query:    1 MKIFSRNASTLLAVGLIVTVARGQTEAECSLSALSGAEVEQLGIYGKDLYLEPDCVNGATPLPVHCNYMGLGQECRGCFLTCDGATQYMDDFSEEITVWGADAVIHFCPDAEVDGLEDC 119
            MKIFS  A+ + AV   ++ AR + E EC +S+LS A  EQL +Y KDLYLEPDCVNGA+P+PVHCNYMGLGQECRGCF+TCDGAT+Y+DDF+EEI+VWG DA++HFCPDAEV+ LE+C
Sbjct:    1 MKIFSHPAAIIFAV---LSFARVKAE-ECIVSSLSDAAQEQLSMYDKDLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMTCDGATRYLDDFAEEISVWGVDAIVHFCPDAEVELLEEC 115          
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 6.900e-32
Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = 0
Query:   29 CSLSALSGAEVEQLGIYGKDLYLEPDCVNGATPLPVHCNYMGLGQECRGCFLTCDGATQYMDDFSEEITVWGADAVIHFCPDAEVDGLEDC 119
            CS+ +L+ A+ +QL +Y  D+YLE DCVN +TPLP+ CNYMGLGQECRGCFLTC GA  Y+DD +E I  +G DAVI+FCP +EV  L +C
Sbjct:  584 CSMDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHILEYGEDAVINFCPQSEVSDLAEC 674          
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: A0A6H5KWI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI6_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 8.670e-21
Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   29 CSLSALSGAEVEQLGIYGKDLYLEPDCVNGATPLPVHCNYMGLGQECRGCFLTCDGATQYMDDFSEEITVWGADAVIHFCPDAEVDGLEDC 119
            CS  +L+  + +QL +Y  D+YLE DCVN +TPLP+ CNYMGLGQECRGCFL                 V G DAVI+FCP +EV  L +C
Sbjct:  489 CSRDSLNDVDQQQLNLYENDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLAL-------------AHVKGEDAVINFCPQSEVSDLAEC 566          
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: A0A6H5KP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP24_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.290e-17
Identity = 39/69 (56.52%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   44 IYGKDLYLEPDCVNGATPLPVHCNYMGLGQECRGCFLTCDGATQYMDDFSEEITVWGADAVIHFCPDAE 112
            +Y K LYLEPDCVNGA+P+PVHCNYMGLGQECRGCF+             E   V G    + FCP AE
Sbjct:    1 MYDKGLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMD-----------KEIAVVRGDRGGMCFCPLAE 58          
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: D7FTU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU6_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.690e-5
Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0
Query:   28 ECSL-SALSGAEVEQLGIY---GKDLYLEPDCVNGATPLPVHCNYMGLGQECRGC-----FLTCDGAT 86
            ECS+ S L+  +V  L  Y   GK +  +P C++G T  P+HCNY GLGQ CRGC        C GAT
Sbjct: 1313 ECSVCSNLTDEQVAVLASYDNGGKQVVCDPSCLDGVTD-PLHCNYFGLGQICRGCGECSLCEPCPGAT 1379          
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: A0A6H5L1V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V0_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 3.330e-5
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   28 ECSL-SALSGAEVEQLGIY---GKDLYLEPDCVNGATPLPVHCNYMGLGQECRGC 78
            ECS+ S L+  +V  L  Y   GK +  +P C++G T  P+HCNY GLGQ CRGC
Sbjct:   14 ECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVTD-PLHCNYFGLGQICRGC 67          
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Match: A0A6H5L314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L314_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 3.950e-5
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   28 ECSL-SALSGAEVEQLGIY---GKDLYLEPDCVNGATPLPVHCNYMGLGQECRGC 78
            ECS+ S L+  +V  L  Y   GK +  +P C++G T  P+HCNY GLGQ CRGC
Sbjct:  430 ECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVTD-PLHCNYFGLGQICRGC 483          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig894.17954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LDU5_ECTSI2.010e-5468.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDU6_ECTSI6.900e-3260.44N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KWI6_9PHAE8.670e-2150.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP24_9PHAE2.290e-1756.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU6_ECTSI1.690e-545.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V0_9PHAE3.330e-549.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L314_9PHAE3.950e-549.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.773

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig894contigL-elsbetiae_contig894:15816..20456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig894.17954.1mRNA_L-elsbetiae_contig894.17954.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig894 15753..21065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig894.17954.1 ID=prot_L-elsbetiae_contig894.17954.1|Name=mRNA_L-elsbetiae_contig894.17954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
MKIFSRNASTLLAVGLIVTVARGQTEAECSLSALSGAEVEQLGIYGKDLY
LEPDCVNGATPLPVHCNYMGLGQECRGCFLTCDGATQYMDDFSEEITVWG
ADAVIHFCPDAEVDGLEDC*
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