prot_L-elsbetiae_contig893.17945.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig893.17945.1
Unique Nameprot_L-elsbetiae_contig893.17945.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length397
Homology
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.240e-7
Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 0
Query:   31 CAGILNGSA--CCGETCGECGGPACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIID 87
            C G+L+G    CC  +CGECGG  CS R  G   CCT+ I   G++C DT G  PCI+D
Sbjct:  453 CNGVLSGMGYYCCAASCGECGGEGCSKRRGGENGCCTKAIQFGGVMCEDTGGQAPCILD 511          
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.320e-7
Identity = 41/100 (41.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:    5 VDAEDFGPVWAARYQRRLATTSSEAMCAGILNGSA--CCGETCGE-CGGPACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIIDGDPEPPPPGSDATP 101
            V+A    P      +  +    + A C GI +G    CC  +CGE CGG  CS +  G E CCT  I +SGILC+DT G PPC I  + E  PP S   P
Sbjct:  700 VEAVPVTPEGTPSPEAAVPVVPAPATCLGIPSGLGQFCCSLSCGEGCGGVGCSDKPGGKEGCCTHAIEESGILCADTGGEPPCRIPPEDETAPPPSPVVP 799          
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Match: A0A813AJ06_SYMMI (Hypothetical protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A813AJ06_SYMMI)

HSP 1 Score: 57.8 bits (138), Expect = 1.000e-5
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   30 MCAGILNGSACCGETCGECGGPACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIIDGD 89
            +C GI +   CC ++CG CGG ACS    G+E+CC R I+ SG  CS    APPC + GD
Sbjct:  131 VCDGIPSTPVCCPDSCGSCGGEACSNFPGGSENCCHRPIVGSGRKCS-ADTAPPCAMYGD 189          
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Match: D7FY01_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.890e-5
Identity = 30/58 (51.72%), Postives = 34/58 (58.62%), Query Frame = 0
Query:   32 AGILNGSACCGETCGECGGPACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIIDGD 89
            AG  N  ACC   CG CGG  CS  G GAE CCT  I+ +   CS+  GA PCI+D D
Sbjct:  386 AGYENSGACCSVGCGTCGGEGCSQLGEGAESCCTSNIIAAREPCSE-KGAAPCIMDTD 442          
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Match: A0A812P0G7_9DINO (SPON1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812P0G7_9DINO)

HSP 1 Score: 57.8 bits (138), Expect = 2.990e-5
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   30 MCAGILNGSACCGETCGECGGPACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIIDGD 89
            +C GI +   CC ++CG CGG ACS    G+E+CC R I+ SG  CS    APPC + GD
Sbjct:  131 VCDGIPSTPVCCPDSCGSCGGEACSNFPGGSENCCHRPIVGSGRKCS-ADTAPPCAMYGD 189          
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Match: A0A6H5JP22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP22_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.490e-5
Identity = 29/56 (51.79%), Postives = 33/56 (58.93%), Query Frame = 0
Query:   32 AGILNGSACCGETCGECGGPACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIID 87
            AG     ACC   CG CGG  CS  G GAE CCT  I+ +G  CS+  GA PCI+D
Sbjct:  405 AGYEKSGACCSVGCGTCGGEGCSQLGQGAESCCTSNIIAAGEPCSE-KGAAPCIMD 459          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig893.17945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K1D2_9PHAE1.240e-749.15Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D7FJN8_ECTSI1.320e-741.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813AJ06_SYMMI1.000e-548.33Hypothetical protein n=4 Tax=Symbiodinium TaxID=29... [more]
D7FY01_ECTSI2.890e-551.72Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A812P0G7_9DINO2.990e-548.33SPON1 protein n=3 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A6H5JP22_9PHAE3.490e-551.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47641:SF1coord: 109..374
NoneNo IPR availablePANTHERPTHR47641FAMILY NOT NAMEDcoord: 109..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig893contigL-elsbetiae_contig893:25741..27275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig893.17945.1mRNA_L-elsbetiae_contig893.17945.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig893 25741..27275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig893.17945.1 ID=prot_L-elsbetiae_contig893.17945.1|Name=mRNA_L-elsbetiae_contig893.17945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=397bp
GSIKVDAEDFGPVWAARYQRRLATTSSEAMCAGILNGSACCGETCGECGG
PACSGRGNGAEDCCTREILDSGILCSDTSGAPPCIIDGDPEPPPPGSDAT
PAPETLEPTPSPVTPETPSPVTPETPSTATPETPSPVTPETPSPVTPETP
SPVSPETPSPVTPETPSPVTPETPSPVTPETPSPVTPETPSPVTPETPSP
VTPETPSPVTPETPSPVTPETPSPVTPETPSPVTPETPSPVTPETPSPVT
PETPSPVTPEMPSPVTPETPSPVAPETPSPETPEPTPIPTPGPATLEPTL
MPTPEPATPEPTTPEPTLIPSPEPTSPEPVPPVPVLPTPIPVAAPPVRVT
PSPVTPAPDQAAPGTGGPVAPPGSPGTPTAAPPSERTVEPTLAPIA*
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