prot_L-elsbetiae_contig8913.17936.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8913.17936.1
Unique Nameprot_L-elsbetiae_contig8913.17936.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length521
Homology
BLAST of mRNA_L-elsbetiae_contig8913.17936.1 vs. uniprot
Match: D8LJK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK4_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 7.760e-145
Identity = 298/522 (57.09%), Postives = 339/522 (64.94%), Query Frame = 0
Query:    3 ILEGALLVLIGVLSPFWLPLPLYRAREAVAGQRRRLRLLGRSAGDGGGGEXXXDXEDGGGVKXXXXXXXXXXXXXXXXGKTASEKAP--TQPERRAAAAAVEGLPGLGRRYLDFIAQALGQGHEAAVAAAAAVTAPYGHGGLPRYSGGHPDNFFIDVSAFDEVVLTTEWEVDGFLAACMVFAVVTAEARRAAPVVPGGAERPYPLRTVIVGEGKAVQAEEALRAMRQTELIPPDCHVDVIEGCGPAAEAENWRHQEPAGGRGLHGKGREXXXXXXXXXXXXPGQGREGDVKSGGRSFFGSCSGLLLRSRVLRSVLGRWFWLPGARRDLHLARCARGRGGGKFDHVDLFVSGGFSGVFAGKGAGSEAPPRPLRRXXXXXXX-GGEGELDRGEVEEAMAAVSRVFVVQLDDLVGRYGFPRAIAPDRTPTLSAAMAGARGVLPAFLRRVIAASNHLALTEFPDRVAAATAAGRYANEELRVTASSIAAAALAEEPGIGRGRVAELGACMADLIASDFEALEAAGL 521
            +LEG L++LIGVLS FWLPLPLYR REAV  +RRRLRLL +S   GG  +   D       K                G+T    A   T  + ++AAAA +G P LGRRYLDF+AQALGQ H AA   AAA+ AP    GLPR  GGHP+  F+DVSA+DEVVLTTEWE DG LAAC++F+VVTAE +RA P    G +RPYPLRT+IVGEGKA QA EAL AMR+T+L+PPDC VDV+E    AA+ E               K RE     XXXXXXX             RSF GSCS LLL   +LRS L    WL G RR L     ARG+G G         SG                   LRR        GG+ EL R +VEEA+A V+RV VVQL+DLV  YGFPRAIAPDRTPTL+AA+AGARGVLP+ LRR IAASNHLALTEFPD+VA+A  AGRYANEELRVTASSIAAAA+AEEPG+GRGRVAELGACMADLIASDFEALE AGL
Sbjct:   12 VLEGVLVLLIGVLSTFWLPLPLYRLREAVTCRRRRLRLLRQSEESGGKVDVGADS------KAIRPVGGRGAGNGGVDGQTTEGAAESLTGQDPKSAAAASDGFPDLGRRYLDFLAQALGQSHSAA---AAAIAAPDRRTGLPRNGGGHPEGCFVDVSAYDEVVLTTEWEADGLLAACLLFSVVTAETKRA-PFASDGTKRPYPLRTLIVGEGKASQAREALEAMRRTKLVPPDCRVDVLEPGEGAAKGE---------------KRREDRGIEXXXXXXXXXXXXXXXXDGVWRSFLGSCSMLLL---LLRSTLR---WLSGRRRGL-----ARGQGEG----XXXXXSG-----------------HSLRRQWHRRPSAGGDEELSREDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIKAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGL 476          
BLAST of mRNA_L-elsbetiae_contig8913.17936.1 vs. uniprot
Match: A0A6H5KHY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY3_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 2.290e-110
Identity = 225/403 (55.83%), Postives = 259/403 (64.27%), Query Frame = 0
Query:  160 FDEVVLTTEWEVDGFLAACMVFAVVTAEARRAAPVVPGGAERPYPLRTVIVGEGKAVQAEEALRAMRQTELIPPDCHVDVIEGCGPAAEAENWRHQEPAGGRGLHGKGREXXXXXXXXXXXXPGQGREGDVKSGGRSFFGSCSGLLLRSRVLRSVLGRWFWLP---------GARRD-------------------LHLARC-----ARGRGGGK-----FDHVDLFVSGGFSGVFAGKGAGSE--APPR-PLRRXXXXXXXGGEGELDRGEVEEAMAAVSRVFVVQLDDLVGRYGFPRAIAPDRTPTLSAAMAGARGVLPAFLRRVIAASNHLALTEFPDRVAAATAAGRYANEELRVTASSIAAAALAEEPGIGRGRVAELGACMADLIASDFEALEAAGL 521
            +D+VVLTTEWE DG LAAC++F+VVTAE +RA P    G +RPYPLR +IVGEGKA QA EAL AMR+T LIPPDC VDV+E    AA+ E  + QE    RG+  +  E                 EG      RSF GSCS LLL    LR + GR   L            R+D                   L   R      A GRGGG+     + H+D+FVSGGFSG F G+  G E  AP   P  +       GG+ EL R +VEEA+A V+RV VVQL+DLV  YGFP AIAPDRTPTL+AA+AGARGVLP+ LRR IAASNHLALTEFPD+VA+A  AGRYANEELRVTASSIAAAA+AEEPG+GRGRVAELGACMADLIASDFEALE AGL
Sbjct:    3 YDQVVLTTEWEADGLLAACLLFSVVTAETKRA-PFASDGTKRPYPLRNLIVGEGKANQAREALEAMRRTNLIPPDCRVDVLEAGEGAAKGE--KRQED---RGIEAEEEE-----------------EGGGDGVWRSFLGSCSVLLLLRSTLRWLFGRRRGLARTKLREVFNATRKDNQRVLVIALKPPRDLVEVLLESGRASWWGRAMGRGGGRRGCSRYKHIDMFVSGGFSGAFRGQREGGECSAPGHSPREQRHRRPSAGGDEELSRDDVEEALARVNRVLVVQLEDLVRPYGFPTAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIEAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGL 382          
BLAST of mRNA_L-elsbetiae_contig8913.17936.1 vs. uniprot
Match: A0A6H5JGT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.420e-28
Identity = 78/156 (50.00%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    3 ILEGALLVLIGVLSPFWLPLPLYRAREAVAGQRRRLRLLGRSAGDGGGGEXXXDXEDGGGVKXXXXXXXXXXXXXXXXGKTASEKAPTQPERRAAAAAVEGLPGLGRRYLDFIAQALGQGHEAAVAAAAAVTAPYGHGGLPRYSGGHPDNFFIDVS 158
            +LEG L++LIGVLS FWLPLPLYR REAV  +RRRLRLL +S   GG      D +    ++                 + A+E   T+ E ++AAAA +G P LGRRYLDF+AQALGQ H AA   AAA+ AP    GLPR  GGHP+  F+DVS
Sbjct:   19 VLEGVLVLLIGVLSTFWLPLPLYRLREAVTCRRRRLRLLRQSEECGGKAGGGADSK---AIRPVGGREAGNGGGHGHTNEGAAESL-TRQEPKSAAAAADGFPDLGRRYLDFLAQALGQSHSAA---AAAIAAPDRRPGLPRNGGGHPEGCFVDVS 167          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8913.17936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJK4_ECTSI7.760e-14557.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHY3_9PHAE2.290e-11055.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGT4_9PHAE3.420e-2850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..521
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8913contigL-elsbetiae_contig8913:239..8046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8913.17936.1mRNA_L-elsbetiae_contig8913.17936.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8913 239..8046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8913.17936.1 ID=prot_L-elsbetiae_contig8913.17936.1|Name=mRNA_L-elsbetiae_contig8913.17936.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=521bp
CGILEGALLVLIGVLSPFWLPLPLYRAREAVAGQRRRLRLLGRSAGDGGG
GEGGGDGEDGGGVKGGRGGTVGDSDGGRIGGKTASEKAPTQPERRAAAAA
VEGLPGLGRRYLDFIAQALGQGHEAAVAAAAAVTAPYGHGGLPRYSGGHP
DNFFIDVSAFDEVVLTTEWEVDGFLAACMVFAVVTAEARRAAPVVPGGAE
RPYPLRTVIVGEGKAVQAEEALRAMRQTELIPPDCHVDVIEGCGPAAEAE
NWRHQEPAGGRGLHGKGREEEEEEEEGGGGGPGQGREGDVKSGGRSFFGS
CSGLLLRSRVLRSVLGRWFWLPGARRDLHLARCARGRGGGKFDHVDLFVS
GGFSGVFAGKGAGSEAPPRPLRRRRRRSSSGGEGELDRGEVEEAMAAVSR
VFVVQLDDLVGRYGFPRAIAPDRTPTLSAAMAGARGVLPAFLRRVIAASN
HLALTEFPDRVAAATAAGRYANEELRVTASSIAAAALAEEPGIGRGRVAE
LGACMADLIASDFEALEAAGL
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