prot_L-elsbetiae_contig8908.17932.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8908.17932.1
Unique Nameprot_L-elsbetiae_contig8908.17932.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length345
Homology
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BLAST of mRNA_L-elsbetiae_contig8908.17932.1 vs. uniprot
Match: A0A6H5K5Q3_9PHAE (AP4E_app_platf domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5Q3_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.470e-18
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0 
Query:    1 QPLAASAAAPQAPLPPPQSSGGAGAPLSTADIFASGPRLRPASKVWGRPKPGE 53
            QP+AASAAAPQAPLPPPQSSGGAG PLSTADIFASGPRLRP SKVWGRP+PGE
Sbjct:  655 QPMAASAAAPQAPLPPPQSSGGAGDPLSTADIFASGPRLRPVSKVWGRPRPGE 707
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8908.17932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5Q3_9PHAE4.470e-1892.45AP4E_app_platf domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8908contigL-elsbetiae_contig8908:4181..6235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8908.17932.1mRNA_L-elsbetiae_contig8908.17932.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8908 4179..6235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8908.17932.1 ID=prot_L-elsbetiae_contig8908.17932.1|Name=mRNA_L-elsbetiae_contig8908.17932.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
QPLAASAAAPQAPLPPPQSSGGAGAPLSTADIFASGPRLRPASKVWGRPK
PGEQQQQQPPGAGGGGAPSAAAAAPAAAAAAASGPSYGRGSWGGGGQGGN
DAAQAPQEDPAAAAQRSEKERMAAMLFGGTGPAKPGSAAAAAAAASAPAP
RPARISTSGTAAATTTTRSAVDTPASSSTSSPQRKASAAASAAAAAPAAA
AAEPVDLLDFMSMGDDDSAPIATNGAVQGHSLAPSDQLGMDLLGGGGSNG
SGPSSPPRAAQTLDDLLGGGSSHNGDLSGAAQDASNGRRNSSGGGGEQAW
PPAARQRAGTVGSTSSPSGSLGTPSLIGGTGKPGGLDLSGLLLGE
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